Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1721 ATGGCTTTAACACTTCGTTCTTCAAACTCCTTCTTTGCTCAGATAGAAACCCAAGTTTCCAAACCTCGTGAAGGTCACTTGTCCTCCACAGTTCGCTTTGCATGGATCAAGTCATCACCATCATCATTCCGACTCAGAGCACCAAGCCATGTTACAGTTGCCGGCGCCGGCGACAAGGTAACGGTCTTAGAAGCAAGCAAGGAGGAGCTGCATCATCCGCCATTGGTGGCTCCTCATAAGCACGATGATTCAATGAAAGTGCCAGTGTTTGTGATGCTGCCTTTAGACACGGTGACGATGGGAGGAACTCTGAACAAGGCGCGAGCCATGAACGCTAGTCTGATGGCCCTAAAAACTGCCGGAGTTGAAGGAGTCATGGTGGATGCTTGGTGGGGCTTGGTTGAAAAAGATGGCCCTATGAGCTATAACTGGGAAGCTTACGCTGAACTTGTTCACATGGTGCAAAAACATGGATTAAAGCTTCAAGTCGTCATGTCCTTTCATCAATGTGGAGGAAACGTCGGCGACTCTTGCAGTATTCCTTTACCTCCTTGGGTGCTTGAAGAAATCAGCAAGAACCCTGACCTGGTTTACACAGACAGGTCTGGGAGGAGAAATCCTGAGTATATTTCTTTGGGGTGTGATTTGATTCCTGTTCTCAGAGGAAGGACGCCTATTCAGGTGTACTCTGACTTTATGACTAGTTTCCGTGACAGATTCAGAGATTACTTGGGCAGTGTTATCCAAGAAATTCAAGTAGGGATGGGACCTTGTGGAGAACTCAGATATCCATCTTATCCAGAAAGCAATCGAACTTGGAGGTTTCCAGGAATTGGTGAATTCCAGTGCTACGACAAGTATATGAGGGCGTCGTTGGAAGCGGCCGCAGAGGCGATTGGGAACAGAGATTGGGGGAGAAGTGGGCCCCACGATTCTGGCCAATACAATCAATTCCCGGAAGATACGGGATTCTTCAGGCGTGAAGGAACATGGAACTCCGATTACGGAAGCTTCTTCCTCGCCTGGTACTCCAACAAATTGATCCAACACGGTGACCGGATCCTCGAATCCGCCGGACGGATATTCCAATCAACCGGAGCCAAACTCTCAGCGAAAGTCGCGGGCATCCATTGGCATTACAATACAAGATCTCACGCCGCCGAGCTAACCGCCGGCTACTACAACACCCGATCCCGCGACGGCTACCTTCCGATCGCACAAATGCTAGCGAAACACGGAGCGATCTTAAACTTCACGTGTATGGAGATGAAGGATTCGCAGCAACCTCATCACGCGAGTTGCTCGCCGGAGGGACTGGTTCGTCAGGTGAAGACGACGGCGAAGACGGCGAGAGTACAACTGGCAGGGGAAAACGCGTTGGAAAGATACGATTGGGATGGGTACGGACAGGTAATGGAAACGAGTAGATCAGACAGCGGGAACGGATTGGTGTCGTTCACGTATTTGAGGATGAACAAGAGGTTGTTCGAAGAACAAAATTGGCGGCAATTTGCGGATTTTGTGAGGAGCATGTCGGAAGGTGGCCGGAGACAGAGACTTCCCGATTATGATACGCGTGGGACTGATCTGTACGTTGCAAACATCAAAGGGATTCACAAGCACAAGCAGGTTCAAGAGGAAGCTCTGGTGTGA 1653 0.4991 MALTLRSSNSFFAQIETQVSKPREGHLSSTVRFAWIKSSPSSFRLRAPSHVTVAGAGDKVTVLEASKEELHHPPLVAPHKHDDSMKVPVFVMLPLDTVTMGGTLNKARAMNASLMALKTAGVEGVMVDAWWGLVEKDGPMSYNWEAYAELVHMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDLIPVLRGRTPIQVYSDFMTSFRDRFRDYLGSVIQEIQVGMGPCGELRYPSYPESNRTWRFPGIGEFQCYDKYMRASLEAAAEAIGNRDWGRSGPHDSGQYNQFPEDTGFFRREGTWNSDYGSFFLAWYSNKLIQHGDRILESAGRIFQSTGAKLSAKVAGIHWHYNTRSHAAELTAGYYNTRSRDGYLPIAQMLAKHGAILNFTCMEMKDSQQPHHASCSPEGLVRQVKTTAKTARVQLAGENALERYDWDGYGQVMETSRSDSGNGLVSFTYLRMNKRLFEEQNWRQFADFVRSMSEGGRRQRLPDYDTRGTDLYVANIKGIHKHKQVQEEALV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1721 550 Pfam Glycosyl hydrolase family 14 90 507 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 Gene3D Glycosidases 80 545 - -
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 425 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 439 461 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 367 383 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 142 160 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 256 278 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 331 350 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 121 135 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 395 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 164 185 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Plant beta-amylase signature 487 501 IPR001371 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Plant beta-amylase signature 405 415 IPR001371 GO:0000272|GO:0016161
Acco12g1721 550 PRINTS Plant beta-amylase signature 246 255 IPR001371 GO:0000272|GO:0016161
Acco12g1721 550 ProSitePatterns Beta-amylase active site 1. 168 176 IPR018238 GO:0000272|GO:0016161
Acco12g1721 550 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 73 519 IPR001554 GO:0000272|GO:0016161
Acco12g1721 550 SUPERFAMILY (Trans)glycosidases 86 514 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1721 Acco-ChrAcco12 28359132 28361109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1721 1 550 Glycoside Hydrolase AT4G17090 68.468 0.0 795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1721 12 28359132 28361109 Acco12g1721 12 28359132 28361109 ECH