Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1612 ATGCATCCTCTTTGCTGTATCTCACTGGAGAGTCCCGGAATCGGGAACCAATCACCGGAGGCGTTGCTTTCGAGGACTAGGAGTTTGCCGGAGAGTTTGGCTTTAGTCGGATCTGAGCACAATGCCGGTGGGCGGGCTCGGGGATCGGAGGCGGCGGTGGCCGGGATCCTCTATAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGGTGGTTCCTCTTGAGAAATGGCGTCCTCTCTTACGCCAAGATCCGGTGGCCGGAAAACCTCAATCTCCTCACGCCAACGGATGACGTCAGGTTGATTGGCGAAATCTCAACTAACCAATTGGCGAGGATGGACAGCGTGAGTAATAGCGTGCGTCGGAAGAACAAGAAATCTGCGTCAGGCGTCGTCCACCTCAAGGTTTCGTCATTTAGAGAGAGCAAATCAGACGATCGACGGTTCTATATCTTTACTGCTACCAAGACTCTCCATCTTAGAACTGATTCAAGGAAAGATCGAGAGGCATGGATACAAGCATTGGAATGTACTCGTTGCTTGCATCCGCTTAGATCACTGAAGGATAATAATATTTCCCTTGTACCCACTGATATATCTATATCAACTGAGAGCCTCAAGAAGCGCTTGCTTGAGGAAGGAGCTTCTGAAAATGTTGTGAAGGAATGTGAACAAATAATGCTCTCTGAGTTCTCGAGAATGCAAGGGCAGCTTAAAATTTTTTGTGAAGAGCGATCAAATTTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAACATTGAACCTGAGGCCTCTGGGATCCATGATGGTGAATACCAGTTAACTAAGCATGAATTTTCAAGTTTGGGACGTGGAAAGTATAGTGAATGCAGTACAACTGAATCATCTGAAGATATTGAGAAACAGGAGATGGAAGAAGTGTCAGACGAAGATGAAATCTCATACTACGACACTGCAGAGGACTTTGCAGAATCTGGCTTCAGGTGTGGGTCATCATCAGGACCTGATGATATCAAGAAAATTCAGCCTCAGATCTCAAGACGAAGAAAGCTTCCTGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGACAATGTGGGAAAGGATCTCTCACGTATTTGCCTTCCTGTGTACTTTAATGAGCCAATATCTTCTCTTCAGAAATGCTGTGAGGACCTAGAATACTCTTACCTTTTGGACCGAGCTTATGAGTATGGAAAATCGGGAAACAATCTCCTTCGGGCACTGAATGTTGCAGCCTTTGCAGTTTCTGGATATGCATCGTCTGAAGGTCGTCACTGTAAACCCTTCAATCCTTTGTTGGGGGAAACTTATGAAGCTGATTTTCCTGAGAAAGGAATTCGATTCTTTTCTGAAAAGGTCAGTCATCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGTGACAGTAACATTCATTCAAAGTTTTGGGGCAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAATTTGATGACGGTGAAATATTTCAGTGGAGTAAGGTCACCACAACAATTTATAATCTTATCCTTGGTAAAATATACTGTGATCATCATGGACACATGGACATACGTGGTAATCGTCAGTATTCATGCAGACTCAAGTTTAAAGAGCAGACTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATGTTTCGGGGAAAAAAGCTGCTGCGGTATTTGGTAAGTGGGATGACAGCATGTACTACGTTATTGGTGATGAGTATGTCAAGTCAAAGCATACTCCATCAGATGCATCAATGTTGTGGAAAAGGACTGAACCTCCTGCTAATCTCACTCGGTACAACATGACATCGTTCGCTATCACTCTGAACGAGCTTGTACCAGGATTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTCAGGCCAGATCAGCGGCATCTAGAGAATGGCGAATATGAGAAGGCCAATTTGGAGAAACAAAGGTTGGAGAAGAGACAAAGAATGTCAAGAAAAATACAAGAAAATGGTTGGAAACCTAAATGGTTCCAAAGAGATGGTGAAAACCGAACATTTCGATACATGGGCGGGTATTGGGAAGCCAAAGGGCAAGGAAAATGGGATGGATGCCCAAATATATTTGGTGAATTTAATGGAGACTTGGTTTCTCCTTTGGATGTATCTTGA 2223 0.4471 MHPLCCISLESPGIGNQSPEALLSRTRSLPESLALVGSEHNAGGRARGSEAAVAGILYKWTNYSKGWRSRWFLLRNGVLSYAKIRWPENLNLLTPTDDVRLIGEISTNQLARMDSVSNSVRRKNKKSASGVVHLKVSSFRESKSDDRRFYIFTATKTLHLRTDSRKDREAWIQALECTRCLHPLRSLKDNNISLVPTDISISTESLKKRLLEEGASENVVKECEQIMLSEFSRMQGQLKIFCEERSNLLDTIRQLEAANIEPEASGIHDGEYQLTKHEFSSLGRGKYSECSTTESSEDIEKQEMEEVSDEDEISYYDTAEDFAESGFRCGSSSGPDDIKKIQPQISRRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCCEDLEYSYLLDRAYEYGKSGNNLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGHMDIRGNRQYSCRLKFKEQTILDRNPHQVHGFVEDVSGKKAAAVFGKWDDSMYYVIGDEYVKSKHTPSDASMLWKRTEPPANLTRYNMTSFAITLNELVPGLKEKLPPTDSRLRPDQRHLENGEYEKANLEKQRLEKRQRMSRKIQENGWKPKWFQRDGENRTFRYMGGYWEAKGQGKWDGCPNIFGEFNGDLVSPLDVS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1612 740 SMART PH_update 51 182 IPR001849 -
Acco12g1612 740 SUPERFAMILY PH domain-like 52 176 - -
Acco12g1612 740 Gene3D - 47 181 IPR011993 -
Acco12g1612 740 SUPERFAMILY Oxysterol-binding protein-like 357 731 IPR037239 -
Acco12g1612 740 Pfam Pleckstrin homology domain 55 176 - -
Acco12g1612 740 Pfam Oxysterol-binding protein 362 714 IPR000648 GO:0008289
Acco12g1612 740 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 52 714 IPR000648 GO:0008289
Acco12g1612 740 Gene3D - 448 621 - -
Acco12g1612 740 MobiDBLite consensus disorder prediction 285 311 - -
Acco12g1612 740 FunFam Oxysterol-binding protein-related protein 2A 657 728 - -
Acco12g1612 740 FunFam oxysterol-binding protein-related protein 1D isoform X1 448 618 - -
Acco12g1612 740 Coils Coil 658 687 - -
Acco12g1612 740 Gene3D - 657 716 - -
Acco12g1612 740 ProSiteProfiles PH domain profile. 50 180 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1612 Acco-ChrAcco12 26526854 26536684 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1612 12 26526854 26536684 Acco12g1612 12 26526854 26536684 ECH