Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1134 ATGCCCTCAGGGTCTTCTTGCGACTTCTGGAATCATTGGCGCGTCCACCGGGAATTCATAGAAATTAAAGTTGGTAAGAGGCTCTGGTGTTTTCAGTTTTTTGGTTGTTCTAGGAATTGCATTCTTTCATTTAGCCCTAAAGCGAAGGATCCTCAATCTTTGATGGAGCAACATTGGATCACACCCTCTGTTGTTCGTTGAAATCTTGGGAGCAAAATGTCCAATGTTGATGAACCACTATATCCAATACGGGTGCTCATTGACGAGCTCAAAAATGATGACATCCAGCTACGCCTAAATTCAATTCGCAAACTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACTTGTACGGAATTAATTCCATTTCTAAGTGAGAGCAATGATGATGATGATGAGGTACTTCTTGCAATGGCAGAAGAGTTGGGAGTATTCATTCCTTATGTTGGGGGAGTAGAACATGCCAATGTATTACTCCCACCTCTGGAAACACTTTGCACGGTCGAGGAAACTTGTGTGAGAGACAAAGCAGTGGAGTCTCTTTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGATTCATTTATCCCGTTGGTGAAGAGATTGGCAGCAGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGACTATTTCATATTGCATACTCAAGTGCGCCAGAGACATCAAAGACTGAGTTGAGGTCAATATACAGCCAACTGTGTCAAGATGACATGCCTATGGTTAGAAGGTCTGCTGCATCAAACCTTGGCAAATTTGCAGCAACTGTTGAATATCCTCATCTGAAGTCTGACGTCATGCAAATTTTTGAGGATCTTACTCAGGATGATCAAGACTCTGTTAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTTTTGGAACCTCAAGATTGTGTTGCACATATACTCCCTGTTATTGTCAACTTCTCTCAGGATAAGTCTTGGCGTGTGCGATACATGGTCGCTAACCAGTTGTATGAGCTATGTGAGGCTGTAGGCCCTGATACCACCAGAATGGAGTTGGTCCCCGCATATGTTCGGTTGCTACGAGACAATGAAGCTGAAGTGCGTATTGCAGCTGCTGGAAAAGTCACAAAATTCTGTAAAATTTTAAATCCAGAACTGGCTATTCAGCATATTCTCCCTTGCGTCAAGGAATTGTCATCAGATTCTTCACAGCATGTCCGTTCTGCTTTGGCTTCAGTAATTATGGGAATGGCTCCAGTGTTGGGAAAGGATGCTACAATTGAGCAGCTTCTTCCTATTTTTCTCTCCCTTCTAAAGGATGAATTTCCTGATGTTCGCTTGAACATCATCAGCAAACTTGATCAAGTGAATCAGGTTATTGGAATTGATTTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTAGCTGAAGATAGGCATTGGAGAGTTCGCCTTGCGATAATAGAGTATATACCCTTGTTGGCAAGTCAACTGGGTGTAAGATTTTTTGATGACAAACTAGGTGCTCTTTGCATGCAATGGTTACAGGATAAGGTTCATTCAATCCGTGAAGCAGCTGCTAACAATTTGAAGCGGCTTGCTGAAGAATTTGGTCCTGAGTGGGCTATGCAGCATATAATTCCACAGGTTTTGGAGATGATCAACAATCCACATTACTTGTATCGGATGACCATTCTTCAAGCTATCTCTCTGCTTGCTCCTGTAATGGGGGCTGAAATCACTTGTTCGAAATTGTTGCCTGTCGTTATCACTGCATCAAAAGACAAGGTACCCAACATCAAGTTCAATGTCGCAAAGGTGTTGGAGTCAATCTTCCCCATCGTTGATCAATCTGTGGTGGAAAATACAATTCGTCCATGTCTGGTTGAGCTTAGCGAGGATCCTGATGTGGATGTTCGACACTTTTCGAACAAAGCGCTTCAGGCAATTGATCATGTAATGATGTGTAGTTAG 1980 0.4313 MPSGSSCDFWNHWRVHREFIEIKVGKRLWCFQFFGCSRNCILSFSPKAKDPQSLMEQHWITPSVVRXNLGSKMSNVDEPLYPIRVLIDELKNDDIQLRLNSIRKLSTIARALGEERTCTELIPFLSESNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRESDLVDSFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPETSKTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYPHLKSDVMQIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDTTRMELVPAYVRLLRDNEAEVRIAAAGKVTKFCKILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVRFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQVLEMINNPHYLYRMTILQAISLLAPVMGAEITCSKLLPVVITASKDKVPNIKFNVAKVLESIFPIVDQSVVENTIRPCLVELSEDPDVDVRHFSNKALQAIDHVMMCS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 353 391 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 82 120 IPR021133 -
Acco12g1134 659 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 74 654 - -
Acco12g1134 659 Pfam HEAT repeat 314 342 IPR000357 GO:0005515
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 431 469 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 509 547 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 626 659 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 548 586 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 392 430 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 587 625 IPR021133 -
Acco12g1134 659 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 74 653 - -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 275 313 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 236 274 IPR021133 -
Acco12g1134 659 SUPERFAMILY ARM repeat 80 652 IPR016024 -
Acco12g1134 659 Gene3D - 73 655 IPR011989 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 314 352 IPR021133 -
Acco12g1134 659 ProSiteProfiles HEAT repeat profile. 470 508 IPR021133 -
Acco12g1134 659 Pfam HEAT repeats 433 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1134 Acco-ChrAcco12 12735305 12745320 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1134 12 12735305 12745320 Acco12g1134 12 12735305 12745320 ECH