Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1094 ATGAAAAGCCATGGGATTTGGGTTATCTTTATTTGCTTTCTTCTGGGTGCAACTTGTTTTGGACAAGAAGAGCTTGAAGTGGTTCCAATGGAGAAGAGAGAGCTTGAAGCTCTATACTCTACCATACAAGGCTTTGTCGGAAATTGGTGGAATGGCTCAGATCTCTATCCGGATCCTTGTGGGTGGACTCCAATTCAGGGTGTCTCTTGTGATCTATTTAATGGGTTTTGGTATGTTACTTCCTTGAACATCGGACCCATACATGAAAATTCTATATCTTGTTCCCAGAAGTCAGAATTTAGGCGTCACTTGTTTGAGTTCAAGCACCTACAATCTCTGTCCTTATTCAACTGCTTTGTATCTAGAGACCAAAATCCAGTTACTATCCCAACTGGGAACTGGGAGAAACTTTCTGGAAGCCTAGAATCACTTGAGTTTCGGTCGAATCCAGGTCTCATTGAAAAAATCCCCGCAAGTTTTGGTCTCCTCAACAACCTCAAATCTCTGGTATTACTAGGAAATGGTTTAACAGGGGAAATACCACCAGATATAGGTAATCTTATGAAACTTAAGAGACTTGTTCTTGCGGAGAACTCTTGTAGTGGGCAGATTCCAGATATTTTCAGCAAGTTAAGTGAATTGCTGATATTGGATTTAAGTAGAAATTCACTTTCTGGGTCTTTGCCTTTATCTCTTGGAAGCTTAACTTCATTATTGAAGCTTGATGTAAGCAGCAATAATCTAGAAGGAAATCTGCTAAATGGGTTTGGTAATCTCAAGAATCTGACCCTAATGGACCTAAGAAACAACAGATTCCAAGGTGGGTTGGTGTTGTCTATTCAAGAGATGTATTCCTTAGAAGAATTGGCCTTATCCAACAATCCAATTGGTGGAAGCTTCAGTGTTCTAAAGTGGGAAAATCTTCAGAACTTGGTAATTCTTGAACTCTCTAACATGGGATTGACAGGGGAAATACCGGAGTCCATAACAGAGTTAAGGAGATTGAGGTTTTTGGGTCTACGTGACAACCGCCTTACTGGCAACCTTAATCCTAAGCTAGAAGCTCTTCCTTGTCTCAATGCACTTTACCTTAGTGGAAACAATCTGACCGGAGACCTTAAATTCTCCGAGCAGTTTTATGGCAAAATGGGTAGCCGTTTTGGGGCCTGGGATAACCCTAACCTTTGTTACCCTGTTGGAGAAATATCAACAAGTCAAGTTCCATTTGGAGTAAGACCTTGCCATCAAGAGGTCTAG 1257 0.4105 MKSHGIWVIFICFLLGATCFGQEELEVVPMEKRELEALYSTIQGFVGNWWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTSLNIGPIHENSISCSQKSEFRRHLFEFKHLQSLSLFNCFVSRDQNPVTIPTGNWEKLSGSLESLEFRSNPGLIEKIPASFGLLNNLKSLVLLGNGLTGEIPPDIGNLMKLKRLVLAENSCSGQIPDIFSKLSELLILDLSRNSLSGSLPLSLGSLTSLLKLDVSSNNLEGNLLNGFGNLKNLTLMDLRNNRFQGGLVLSIQEMYSLEELALSNNPIGGSFSVLKWENLQNLVILELSNMGLTGEIPESITELRRLRFLGLRDNRLTGNLNPKLEALPCLNALYLSGNNLTGDLKFSEQFYGKMGSRFGAWDNPNLCYPVGEISTSQVPFGVRPCHQEV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1094 418 PRINTS Leucine-rich repeat signature 214 227 - -
Acco12g1094 418 PRINTS Leucine-rich repeat signature 235 248 - -
Acco12g1094 418 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Acco12g1094 418 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 241 397 - -
Acco12g1094 418 FunFam Piriformospora indica-insensitive protein 2 205 301 - -
Acco12g1094 418 Gene3D Ribonuclease Inhibitor 304 401 IPR032675 -
Acco12g1094 418 Gene3D Ribonuclease Inhibitor 32 204 IPR032675 -
Acco12g1094 418 Gene3D Ribonuclease Inhibitor 205 303 IPR032675 -
Acco12g1094 418 FunFam Piriformospora indica-insensitive protein 2 302 404 - -
Acco12g1094 418 FunFam Piriformospora indica-insensitive protein 2 33 204 - -
Acco12g1094 418 SUPERFAMILY L domain-like 37 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1094 Acco-ChrAcco12 11898433 11900190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g1094 140 414 Receptor kinase-like Gene Family AT4G08850 29.455 3.90e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1094 12 11898433 11900190 Acco12g1094 12 11898433 11900190 ECH