Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1089 ATGAATGACCAGGTCGCAGCGCCGCCGGTGCCGAGGGTGAGCGTGGTGGTGTTCCTCCTGAAGGGTAGATCGATACTCCTAGGTCGGCGGCGCTCCTCCGTTGGCGACTCCACTTACGCTCTTCCCGGCGGCCACCTGGAGTTTGGCGAGAGCTTCGAGGAATGTGCGATTAGAGAGGTGAAAGAGGAAACGGGGTTGGAGATTAGGAAAACGGAGTTCATAATGGTGACGAACAACGTGATGCTGAATGAACCAAAGCCGTGTCACTACGTCACCGTTTTGATGCGAGCTGAACCGGCCGATCCAGAGGAAGAGCCGAAGAACATGGAACCAGACAAGTGTGATGGATGGGAGTGGTTTGAATGGGGAAATCTTCCAAAACCACTGTTTGGGCCTCTGGAAAAATGGGTCAATGAAGGATTCAAGCCATTTCCTCCTACCTGA 444 0.5383 MNDQVAAPPVPRVSVVVFLLKGRSILLGRRRSSVGDSTYALPGGHLEFGESFEECAIREVKEETGLEIRKTEFIMVTNNVMLNEPKPCHYVTVLMRAEPADPEEEPKNMEPDKCDGWEWFEWGNLPKPLFGPLEKWVNEGFKPFPPT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1089 147 ProSiteProfiles Nudix hydrolase domain profile. 8 143 IPR000086 -
Acco12g1089 147 PANTHER 8-OXO-DGTP DIPHOSPHATES NUDT15 4 145 - -
Acco12g1089 147 Pfam NUDIX domain 12 128 IPR000086 -
Acco12g1089 147 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 146 - -
Acco12g1089 147 SUPERFAMILY Nudix 7 138 IPR015797 -
Acco12g1089 147 CDD Nudix_Hydrolase_19 25 135 - -
Acco12g1089 147 ProSitePatterns Nudix box signature. 44 65 IPR020084 GO:0016787
Acco12g1089 147 PRINTS NUDIX hydrolase family signature 39 53 IPR020476 -
Acco12g1089 147 PRINTS NUDIX hydrolase family signature 53 68 IPR020476 -
Acco12g1089 147 FunFam Nucleotide triphosphate diphosphatase NUDT15 3 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1089 Acco-ChrAcco12 11754868 11755415 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1089 12 11754868 11755415 Acco12g1089 12 11754868 11755415 ECH