Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g1085 ATGGCTGATAACACAGACGACATAGCGGAGGAAATCTCGTTTCAGAGCTTCGACGATGACTGTAGATTGCTGGGAAATATGCTCAACGACGTCTTGCAACGAGAAGTTGGAAGTCCGTTCATGGAGAAACTGGAAAAAATCCGAGTTCTTGCTCAGAGTGCTTGTAATATGAGGCAGGCAGGGATTGAGGAGATGGCTGAGCTGGTCGAGAAGCAGTTGGCTTCAGAGCTATCGGAGATGACTTTAGAAGACGCTCTCACTCTTGCTCGTGCCTTCAGTCATCATCTTACTTTGACGGGCATAGCTGAAACCCATCACAGGGTTCGTAAAGGACGGAATGTGGCATATTTATCTAAATCTTGTGATGACATATTTAACCAGTTGCTGCAAAGTGGAGTTTCCCCTGATGAGCTTTATAACACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTTACAGCGCATCCCACACAAATCAATCGCCGTACTTTACAATACAAACATATTAGAATTGCTCATCTTTTGGATCTTAATGATCGACCTGATCTTAGTTTTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACCTCAATATGGCAGACAGATGAGCTTAGGCGTGAAAAACCCACACCTGTTGATGAGGCCAGGGCTGGTTTAAATATTGTGGAGCAGTCACTATGGAAAGCAGTCCCTCATTATTTACGTCGAGTCAGCAATGCTTTAAAGAAGCATACAGGAAAACCACTTCCCTTAACTTGTACTCCTATAAAGTTTGGATCTTGGATGGGGGGTGATAGAGATGGAAACCCAAACGTGACAGCAAAGGTCACAAAAGATGTTACGCTCTTATCGAAGTGGATGGTGATTGACCTCTATTTTCGTGAAGTTGATAACCTTAGATTTGAGCTGTCTATGAATCGGTGCAGTGATAATTTGTTAAGGCTGGCACATGAAATTCTGGAAGAAGAAGCTCTCTCTGAGGATCACCATGAGAATCGGAATCAATCTATGGATAGAAGTCAATTCAAACATCATGGTCAACAAGCTCCATTTCCAACACAACTTCCAGCTAAAGCTCATTTACCCTCTTGTGCTGAAAATGATGAATCTCAGTATCCTAGACTGGATATTCCAGGAAAAGAATACGGGCCACTGAATCATGAGGATGGTGATATTTCTTCTAGCTCAACAACATTCAAGAGTGACAATAATAATAGTCATGCATCATCGAGTTTAGACAATTCGAGTGCTTCTCAAATGCCTACAAATCTACGCTCTAGTCAACTACATACTCCGAGGAAGTTTTATGCTGACTCCCAAACCGGAAGGTCCAGTTTTCAGAAGCTTTTGGAGCCAAAGCTCCCTCAGCTTCCTGGAATTGCTCCTTACAGGGTTGTCCTTGGGAATGTAAAAGATAAGCTTCTAAAAAGTCGAAGACGGTTGGAGCTTCTTCTTGAGGATAGTTCATGTGATTATGATCCTTCAAGTTTTTATGAAACAACTGACCAACTCTTGGAGCCTTTGCTCCTCTGTTATGAATCTCTGCAATCCTGTGGATCTGGGGTGTTAGCTGATGGTCGACTTGCTGACCTAATCCGAAGAGTTGCTACCTTTGGAATGGTGTTGATGAAGCTTGACTTGCGTCAGGAATCTGGCAGACATGCTGAGACACTTGATGCAATTACCAAATATTTGGATATGGGAACTTACAGTGAATGGGATGAAGAAAAGAAACTGGACTTCTTAACTCGAGAACTGAAAGGGAAGAGGCCACTGGTTCCTCCCAGTATAGAAGTTCCTCCTGATGTTAGAGAAGTCTTGGATACCTTCAGAGTTGCGGCTGAGCTAGGAAGTGATTCACTCGGAGCTTATGTGATTTCTATGGCTTCAAGTGCGAGTGATGTTCTTGCGGTGGAGCTTTTACAGAAAGATGCAAGGCTTACTGTTAGTGGGGAGTTGGGAAGAGCATGTCCTGGTGGAACTCTGCGGGTTGTTCCTCTATTTGAAACTGTGAAGGACCTGAGAGGAGCTGGTTCAGTTATTAGACAACTTTTATCAATTGATTGGTATCGTGAACACATCATTAAAAATCATAATGGCCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGGTTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAAGATGTCGTAGCTGCTTGCAATGAGTATGGCATTAAAGTTACTCTTTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGAGGCCCCACATATATGGCTATTCAGTCTCAGCCACCTGGCTCTGTGATGGGAACCCTTCGATCTACTGAGCAGGGAGAGATGGTACAGAACAAGTTTGGATTGCCACAGATTGCTGTGAGACAGCTTGAGATATACACAACAGCTGTGCTACTTGCAACCCTTCGTCCGCCTGTGTCTCCCCGAGAACAAAAATGGCGTAATGTCATGGAAGATATCTCAAAAATTAGCTGCCAATATTACCGAAGTGTGGTATATGAAAATCCAGAATTCCTTGCCTACTTCCATGAAGCCACACCTGAAGCAGAGCTTGGCTTCCTCAACATTGGAAGCCGCCCCACAAGAAGGAAGAACACAAAAGGAATCGGACATCTTCGCGCCATACCGTGGGTTTTTGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAATTGGAGCAGGTTTAAAAGGTGCTTGTGAGGAAGGATATACTGAAGAATTACAAGCCATGTACAAAGAGTGGCCTTTCTTTCAATGTACATTAGACCTTTTAGAGATGGTTCTGGGGAAAGCAGACATTCCTATAGCCAAGCACTATGATGAAGTCCTCGTGTCAGAACAGAGGAAAGAGCTCGGCCGTGAATTAAGGGAGGAGCTCAAAACAACAGAGAAGTTTGTACTTGTTGTTAGTGGACATGAGAAACTTCAGGAGAACAATAGGAGCTTAAGGAGGCTAATTGAGAATAGACTTCCCTTTCTAAACCCCATGAACATGTTGCAAGTGGAGATACTAAAAAGGCTTCGAAGTGATGATGACAATCATAAAATCAGAGACGCTTTGCTTATCACCATAAATGGGATTGCTGCTGGGATGAGGAATACTGGTTAA 3150 0.4365 MADNTDDIAEEISFQSFDDDCRLLGNMLNDVLQREVGSPFMEKLEKIRVLAQSACNMRQAGIEEMAELVEKQLASELSEMTLEDALTLARAFSHHLTLTGIAETHHRVRKGRNVAYLSKSCDDIFNQLLQSGVSPDELYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDLNDRPDLSFEDREMVIEDLVREITSIWQTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVTLLSKWMVIDLYFREVDNLRFELSMNRCSDNLLRLAHEILEEEALSEDHHENRNQSMDRSQFKHHGQQAPFPTQLPAKAHLPSCAENDESQYPRLDIPGKEYGPLNHEDGDISSSSTTFKSDNNNSHASSSLDNSSASQMPTNLRSSQLHTPRKFYADSQTGRSSFQKLLEPKLPQLPGIAPYRVVLGNVKDKLLKSRRRLELLLEDSSCDYDPSSFYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAITKYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPPSIEVPPDVREVLDTFRVAAELGSDSLGAYVISMASSASDVLAVELLQKDARLTVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRQLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQNKFGLPQIAVRQLEIYTTAVLLATLRPPVSPREQKWRNVMEDISKISCQYYRSVVYENPEFLAYFHEATPEAELGFLNIGSRPTRRKNTKGIGHLRAIPWVFAWTQTRFVLPAWLGIGAGLKGACEEGYTEELQAMYKEWPFFQCTLDLLEMVLGKADIPIAKHYDEVLVSEQRKELGRELREELKTTEKFVLVVSGHEKLQENNRSLRRLIENRLPFLNPMNMLQVEILKRLRSDDDNHKIRDALLITINGIAAGMRNTG 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g1085 1049 Gene3D Phosphoenolpyruvate/pyruvate domain 289 354 - -
Acco12g1085 1049 Gene3D Phosphoenolpyruvate/pyruvate domain 396 543 - -
Acco12g1085 1049 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1049 IPR022805 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1049 IPR015813 GO:0003824
Acco12g1085 1049 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 707 719 IPR033129 -
Acco12g1085 1049 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 FunFam Phosphoenolpyruvate carboxylase 1 414 544 - -
Acco12g1085 1049 MobiDBLite consensus disorder prediction 329 358 - -
Acco12g1085 1049 MobiDBLite consensus disorder prediction 329 343 - -
Acco12g1085 1049 Pfam Phosphoenolpyruvate carboxylase 19 334 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 Pfam Phosphoenolpyruvate carboxylase 459 1049 IPR021135 GO:0006099|GO:0008964|GO:0015977
Acco12g1085 1049 MobiDBLite consensus disorder prediction 392 435 - -
Acco12g1085 1049 MobiDBLite consensus disorder prediction 371 435 - -
Acco12g1085 1049 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Acco12g1085 1049 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1049 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g1085 Acco-ChrAcco12 11700890 11709629 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g1085 12 11700890 11709629 Acco12g1085 12 11700890 11709629 ECH