Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0683 ATGGCATTTTTGTCGCAAAAATTTCTATTCTCAGCTCTATTTTCAATCCTCTGCTTTGCCTTTGAGGTTTCTTCATATAGAAGGGTTTATACTCCTCCAAATGTCACACCTTTGACTAGTTCTTTTCCTCGTGTTCCAATTGATCGTGGGTTTTCTAAGTCCTTTGGTGCCTCAAATATTCAGTATCTCAATAATGGGTCCATGGCCACTCTGGCTCTTAACAAGACTTCAGGCTCTGGTTTGGTCTCACAAGGCAGATACTACTATGGATTCTTCAGTGCAGCCATCAAACTACCTGCTGGTCTTTCATCTGGTGTTGTAGTAGCCTTCTATTTGTCAAATGCAGATAAGTTCCCTCACAACCATGATGAGATTGATATTGAGCTTCTGGGACATGACAAGAGAAACGATTGGGTTATTCAAACCAATTTGTATGCAAATGGAAGTGTAAGCACTGGAAGAGAAGAGAAGTTCTATCTCTGGTTTGACCCCGCAAAGGAGCACCATCACTACAGTATCTTATGGAACAGCTATCACACAGTGTTTTTAGTGGACAATATTCCAGTGAGAGAGTTCATCCACAGTAATTCATATCCTTCTATATACCCATCAAAGCCAATGTCGGTTTATGCAACAATATGGGACGCATCAGATTGGGCAACACATGGAGGGAAATACCCAGTGAATTATAAGTATGCTCCATTTGTTGCTTCTTTCACTGAAATGGAATTAAGTGGTTGTGTGGTTTCAAATCCTTCAGAAACATCATCATCATCATCATCAGCTTCTTCTTCTTCATCTTCTTCTACTACTACATGCCCACAATCTTCTTCAAGTTCTTCAGGCTTGGACCCTGCAAATGGACCTGAGTTCTCTAAGCTGTCTCAGCAGCAGATTGCAGCCATGGATTGGGCAAGAAGGAAACTCATGTTTTACTCTTATTGTAATGATAAACCCAGGTACAAAGTCATGCCTCCAGAATGCCACTGA 990 0.4111 MAFLSQKFLFSALFSILCFAFEVSSYRRVYTPPNVTPLTSSFPRVPIDRGFSKSFGASNIQYLNNGSMATLALNKTSGSGLVSQGRYYYGFFSAAIKLPAGLSSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNLYANGSVSTGREEKFYLWFDPAKEHHHYSILWNSYHTVFLVDNIPVREFIHSNSYPSIYPSKPMSVYATIWDASDWATHGGKYPVNYKYAPFVASFTEMELSGCVVSNPSETSSSSSSASSSSSSSTTTCPQSSSSSSGLDPANGPEFSKLSQQQIAAMDWARRKLMFYSYCNDKPRYKVMPPECH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0683 329 Gene3D - 30 328 - -
Acco12g0683 329 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 239 IPR000757 GO:0004553|GO:0005975
Acco12g0683 329 Pfam Glycosyl hydrolases family 16 51 231 IPR000757 GO:0004553|GO:0005975
Acco12g0683 329 MobiDBLite consensus disorder prediction 255 292 - -
Acco12g0683 329 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 328 IPR044791 GO:0004553
Acco12g0683 329 PIRSF EndGlu_transf 10 329 IPR016455 GO:0010411|GO:0016762|GO:0042546
Acco12g0683 329 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 292 328 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Acco12g0683 329 SUPERFAMILY Concanavalin A-like lectins/glucanases 52 328 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0683 Acco-ChrAcco12 6319852 6321245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0683 11 329 Glycoside Hydrolase AT1G10550 61.129 4.20e-146 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0683 12 6319852 6321245 Acco12g0683 12 6319852 6321245 ECH