Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0661 ATGAGAGAATTTAGCTTCAGAAGCCTCACATTTATAGTTTTGGTTGCATTTCTAGTGTGGTCTTCCAATTTTGAAGCCTGCATTGCAAGAAGAGGCAAGCATTGGAGGCAAAACAGAGACGTGTCAGCTTATCAGTACAAGAAGAAAGGAAAGAGCCATGGCAATAAACACTACAACCACCATGGAGGAGGAGGAGGATCACATTCTAAACCAAATTCTCCTCCACGTTATAAAATTACTCCATCACTACCACCACCACAACCACCAATTCCAAAGCCAAAGAAAGGTACTCCTTCAGCTTCACCACCAAAAGGTTACAATGTGGGTCATTCTTCCACCTTCAATGTCCTAGATTTTGGAGCTAAGGGCGATGGAAAAACTGATGATACAAAGGCATTTGAAGCTGCATGGGCAGCTGCATGCAAGGTACAAGCATCAACCATGCTCATCCCAGCAGATTATGTCTTCTTCGTGGGACCCATTTCCTTCTCTGGTCCATACTGCAAACCCAACATAGTTTTTCAGCTTGATGGAACAATTATTGCCCCAACAAATCCCCAGGCGTGGGGGAGAGGATTGTTGCAGTGGTTGGATTTCACAAAGCTGGTTGGAATTACCATTCAAGGAAAGGGAGTCATTGATGGAAGAGGCTCAGTCTGGTGGCAAGACCAACCATTTGATAATCCCATTGATGATGAAGAAAAGCTCATAGTCCCAATAAACAACTCAGTGAAGAGCCCTCCACCAATACTGGTTCAAAGTGAGCTGGGAGGGAAAATGCCATTCGTCAAGCCAACTGCACTACGGTTTTATGGCAGTTTTAATCCAACAGTCACAGGCATAACAATTCAAAATAGCCAACAGTGTCACCTCAAGTTTGATAATTGCAATGGCGTCCTGGTCCATGATGTGAGCATTTCATCTCCTGGTGACAGTCCCAATACAGATGGAATTCACCTTCAGAATTCCAAAGATGTTTTGATTCACAGCAGCAAATTAGCTTGTGGGGATGACTGTATTTCCATACAAACTGGATGCTCAAATGTATATGTGCACAATGTGAACTGCGGTCCAGGACATGGAATCAGCATTGGAAGTTTAGGGAAGGATAACACAAGAGCCTGTGTCTCAAACATTACTGTCAGAGATGTCAATATGCACAACACAATGAATGGTGTCAGAATCAAAACGTGGCAGGGTGGATCGGGATCTGTACAGGGCGTCTTCTTCTCAAACATACTAGTTTCTGAAGTTCAACTCCCAATTGTGATAGACCAATATTATTGTGATAAAAGGATATGCAAAAACCAGACATCAGCAGTGGCACTTCAAGGAATCAACTACGAAAGAATAAGGGGAACATACACAGTCAAGCCCGTGCATTTTGCCTGTAGTGATAGCCTGCCATGTGCAGATGTTACTTTAACCTCCATAGAGCTAAAACCACTTCAAGAACAATACCACCTATATGATCCATTCTGCTGGCAGACTTTTGGAGAATTAAGAACTCCAACAACTCCACCAATTGCATGTCTACAGATTGGGAAGCCATCCAGCAATCGGGTTCAGATCGATCATGAATTGTGTTGA 1590 0.4327 MREFSFRSLTFIVLVAFLVWSSNFEACIARRGKHWRQNRDVSAYQYKKKGKSHGNKHYNHHGGGGGSHSKPNSPPRYKITPSLPPPQPPIPKPKKGTPSASPPKGYNVGHSSTFNVLDFGAKGDGKTDDTKAFEAAWAAACKVQASTMLIPADYVFFVGPISFSGPYCKPNIVFQLDGTIIAPTNPQAWGRGLLQWLDFTKLVGITIQGKGVIDGRGSVWWQDQPFDNPIDDEEKLIVPINNSVKSPPPILVQSELGGKMPFVKPTALRFYGSFNPTVTGITIQNSQQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVFFSNILVSEVQLPIVIDQYYCDKRICKNQTSAVALQGINYERIRGTYTVKPVHFACSDSLPCADVTLTSIELKPLQEQYHLYDPFCWQTFGELRTPTTPPIACLQIGKPSSNRVQIDHELC 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0661 529 MobiDBLite consensus disorder prediction 77 98 - -
Acco12g0661 529 FunFam polygalacturonase At1g48100 102 514 - -
Acco12g0661 529 SUPERFAMILY Pectin lyase-like 111 522 IPR011050 -
Acco12g0661 529 PANTHER - 112 498 - -
Acco12g0661 529 ProSitePatterns Polygalacturonase active site. 353 366 IPR000743 GO:0004650|GO:0005975
Acco12g0661 529 SMART pbh1 296 322 IPR006626 -
Acco12g0661 529 SMART pbh1 346 366 IPR006626 -
Acco12g0661 529 SMART pbh1 323 344 IPR006626 -
Acco12g0661 529 SMART pbh1 376 397 IPR006626 -
Acco12g0661 529 Gene3D - 106 520 IPR012334 -
Acco12g0661 529 MobiDBLite consensus disorder prediction 48 105 - -
Acco12g0661 529 Pfam Glycosyl hydrolases family 28 143 225 IPR000743 GO:0004650|GO:0005975
Acco12g0661 529 Pfam Glycosyl hydrolases family 28 264 481 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0661 Acco-ChrAcco12 6106621 6111219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0661 2 529 Glycoside Hydrolase AT1G60590 64.855 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0661 12 6106621 6111219 Acco12g0661 12 6106621 6111219 ECH