Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0195 ATGGGTACGCTTCAGACTTGGAGAAAAGCTTATGGTGCCCTCAAAGATTCTACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTATGCGGATTTGGAGGTTGCCATAGTCAAAGCCACGAACCACGTTGAATGCCCTCCCAAGGAGAGACACCTTAGAAAAATTCTACTTGCCACGTCTGCTATTCGACCCCGAGCTGATGTTGCTTACTGCATTCATGCACTGGCCCGTCGATTGTCCAAGACACGAAATTGGACGGTGGCACTAAAAACACTGATAGTCATCCATAGGCTATTAAGAGAGAGTGATCCTACTTTTAAAGAAGAATTTCTTAATTTCTCCCAAAGAGGACGCATTCTCCAACTTTCTAATTTTAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCTTGGGTACGCACTTATGCATTGTTTCTGGAAGAGAAGCTTGAATGTTTTCGGGTTTTGAAGTATGATGTTGAAGCTGAACGTCTTCCCAAGCCTGCCCAAGGACAGGAAGGGCAGGAGAAGGGTTACAGCAGGACAAGAGATCTGGAAAGTGAAGAACTATTGGAGCAGTTGCCTGCTTTACAGCAGCTTCTCTATCGGCTTATTGGTTGCAAGCCAGAAGGAGCGGCTTTCAGCAATTATGTGATACAATATGCTCTAGCTCTGGTACTGAAAGAGAGCTTCAAGATTTATTGTGCTGTTAATGATGGAATCATCAATCTTGTTGATAAGTTTTTTGAGATGCCGAGACATGAAGCTATCAAAGCCCTTGAAATCTACAGACGTGCTGGCCAGCAGGCAGCAAATTTATCTGACTTCTATGAAGTATGCAAAGGTTTAGAACTTGCTCGGAATTTTCAGTTTCCTGTCCTAAGAGAGCCTCCTCAATCTTTTCTTGCGACCATGGATGAGTACATAAGAGAGGCACCACGAGTGGTGACTGTGCCAACTGAGCCATTGCTTCAGTTGACATATAGACCAGAGGAAGAAGTTCCTGCAATTGAAGACGGTAAAGTATCTGTTGAAGAGGACAAGCCGTCAGTGCCTGCAGATGATGTTGTCTCCCATTCTGAGGCTGTTCCCCCTCCTCCGCTTCCATCTCAAAACAATTTTGACACTGGAGACTTACTGGGTTTGAATGACACTGCACCTGATGCATCATCAATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTACCTGCAGAAAATGGCACAACATCTGGTTTTGAATCTAGTACGACTCAAGCAAAAGATTTTGATCCAACTGGATGGGAGCTTGCTTTGGTTTCCACTCCGAGTAGCAATATTTCTTCAGTCAATGAAAGACAATTGGCTGGTGGAATGGACTCGCTCACTCTTAACAGCTTATACGATGAAGCAGCATATAGAGCACAGCAGCCAGTGTATGGTGCACCGGCTCCAAATCCATTTGAGGTTCAAGATCCATTTTCTTTCTCAAGCAGCATCCCTCCTCCTACTGCTGTCCAAATGGCAGCGATGTCTCAGCAGCAAACAAATCCATTTGGTCCATTCCAACCTTTTCAGCCTCAGCCACAGCCACAGCAGCAGCATCTGTTGATGAGCGCCACAAATCCTTTTGGGGATGCAGGATTTGGGGCGTTTCCTGTGAATCCTGTTTCTCATCCACAGAACAACAACAATCCATTTGGTAACCCTGGCTTGCTATGA 1704 0.4531 MGTLQTWRKAYGALKDSTKVGLAHVNSDYADLEVAIVKATNHVECPPKERHLRKILLATSAIRPRADVAYCIHALARRLSKTRNWTVALKTLIVIHRLLRESDPTFKEEFLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEEKLECFRVLKYDVEAERLPKPAQGQEGQEKGYSRTRDLESEELLEQLPALQQLLYRLIGCKPEGAAFSNYVIQYALALVLKESFKIYCAVNDGIINLVDKFFEMPRHEAIKALEIYRRAGQQAANLSDFYEVCKGLELARNFQFPVLREPPQSFLATMDEYIREAPRVVTVPTEPLLQLTYRPEEEVPAIEDGKVSVEEDKPSVPADDVVSHSEAVPPPPLPSQNNFDTGDLLGLNDTAPDASSIEERNALALAIVPAENGTTSGFESSTTQAKDFDPTGWELALVSTPSSNISSVNERQLAGGMDSLTLNSLYDEAAYRAQQPVYGAPAPNPFEVQDPFSFSSSIPPPTAVQMAAMSQQQTNPFGPFQPFQPQPQPQQQHLLMSATNPFGDAGFGAFPVNPVSHPQNNNNPFGNPGLL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0195 567 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Acco12g0195 567 FunFam Clathrin assembly protein AP180 6 161 - -
Acco12g0195 567 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 508 IPR045192 GO:0048268|GO:0072583
Acco12g0195 567 Gene3D ANTH domain 176 327 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Acco12g0195 567 SUPERFAMILY GAT-like domain 181 312 - -
Acco12g0195 567 MobiDBLite consensus disorder prediction 337 388 - -
Acco12g0195 567 SMART enth_2 30 161 IPR013809 -
Acco12g0195 567 FunFam Putative clathrin assembly protein 176 324 - -
Acco12g0195 567 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Acco12g0195 567 Pfam ANTH domain 31 312 IPR011417 GO:0005543
Acco12g0195 567 MobiDBLite consensus disorder prediction 543 567 - -
Acco12g0195 567 CDD ANTH_N 32 154 - -
Acco12g0195 567 MobiDBLite consensus disorder prediction 502 524 - -
Acco12g0195 567 MobiDBLite consensus disorder prediction 550 567 - -
Acco12g0195 567 Gene3D - 7 161 IPR008942 -
Acco12g0195 567 MobiDBLite consensus disorder prediction 337 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0195 Acco-ChrAcco12 1695564 1700156 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0195 12 1695564 1700156 Acco12g0195 12 1695564 1700156 ECH