Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0168 ATGGGTTCTGAAGGATCCTCGGTTGTTGTACCCAGGAGTTTCAGATTATTGGAAGAGCTTGAAAGAGGTGAAAAGGGAATCGGTGATGGAACTGTCAGCTATGGCATGGATGATGCTGATGATATATACATGCAGTCATGGACTGGGACTATTATCGGTCCCCCTGGTACCGTTCATGAAGGACGTATCCACCAATTGAAATTGTTCTGCGGTAAGGATTATCCAGACAATCCACCATCTGTAAGATTTCAAACAAGGATTAACATGACTTGTGTCAACCAAGACACTGGAGTGGTTGAGCCACATTTGTTTCCTATGCTGGCTAATTGGCAGCGCGAGCATACAATGGAAGACATTCTGATGCAATTGAAGAAAGAAATGATGTCTCCTCAAAATCGGAAGCTAGTTCAACCTCCTGAAGGTCACGAAGATGGCAGGATTGATCAAAAGGGGCTGGTGCTGAAATGCTGTATCGTGTAA 480 0.4437 MGSEGSSVVVPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIHQLKLFCGKDYPDNPPSVRFQTRINMTCVNQDTGVVEPHLFPMLANWQREHTMEDILMQLKKEMMSPQNRKLVQPPEGHEDGRIDQKGLVLKCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0168 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Acco12g0168 159 SUPERFAMILY UBC-like 9 141 IPR016135 -
Acco12g0168 159 SMART ubc_7 14 158 - -
Acco12g0168 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 134 - -
Acco12g0168 159 Pfam Ubiquitin-conjugating enzyme 41 134 IPR000608 -
Acco12g0168 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Acco12g0168 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0168 Acco-ChrAcco12 1456983 1460990 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0168 12 1456983 1460990 Acco12g0168 12 1456983 1460990 ECH