Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0152 ATGGCGACCATGACGAGCTTGATCGGGCTAATCAATAAGATTCAACGGGCGTGTACGGTTTTAGGAGACCATGGTGGCGAGGGATTGTCCCTCTGGGAGGCTCTTCCCTCGGTGGCGGTGGTCGGAGGCCAGAGTTCAGGGAAATCGTCTGTGTTGGAAAGTGTGGTCGGAAGGGATTTTCTGCCTCGAGGGTCTGGCATTGTCACAAGGAGGCCACTAGTGCTTCAGCTTCATAAGACTGAAGATGGGCAGCAAGAATATGCCGAGTTTCTCCATGCACCAAGAAAGAGATTCACTGACTTTGCTTCTGTGAGAAAGGAAATATCAGATGAAACAGATCGCATAACTGGGAAGACAAAGCAAATATCAAATATTCCAATTCATCTCAGCATATATTCTCCAAATGTCGTAAACTTAACCCTCATAGATCTTCCTGGATTGACGAAGGTTGCAGTGGAGGGACAATCAGAAACTATAGTTGAAGATATTGAGAACATGGTCCGTAACTATGTTGAGAAGCCAAACTGCATCATATTGGCTATTTCGCCAGCAAACCAAGATATTGCCACTTCAGATGCTATAAAACTTGCTAAAGAAGTTGATCCTTCAGGGGAAAGAACATTTGGAGTGTTGACAAAACTGGATCTTATGGATAAAGGAACCAATGCCGTTGATGTACTTGAAGGAAGGCAATACAGGCTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAACAAAAATGTTGACATGATTGTTGCTCGTAAGAAGGAAAGTGAATATTTTGAGACAAGCCCTGAATATGGACATCTGGCTCATAAAATGGGCTCAGAATATCTTGCTAAGCTTTTATCTGAGCATTTAGAGATTGTTATCAGACAGAAGATTCCCAGTATCATTGCCTTAATAAACAAGACCATTGATGAGCTTAATGCAGAGTTGGATCGTATTGGCAGGCCTATCGCTGTAGATTCTGGGGCCCAACTATACACGATTTTAGAGATGTGTCGTGCATTTGACAAAGTATTTAGAGAACACCTTGATGGAGGGCGTCCTGGTGGGGATCGGATAAATGGAGTTTTCGACCATCAATTGCCAGCTGCTTTGAAAAAGCTTCCATTTGATCGTCACCTAACCATAAATAATGTACAGAGAGTTGTTACAGAAGCTGATGGATATCAACCTCATCTGATTGCTCCTGAGCAAGGCTACAGAAGACTTATTGAAGGATCTATCAGCTATTTCAAAGGCCCCGCTGAAGCTTCTGTCGATGCTGTTCACTTCATCCTAAAGGAACTTATACGGAAGTCGATTTCAGAAACTGAGGAACTGAAAAGATTTCCAACCCTTCAGTCTGATATAGCTGCTTCTGCTAACGAGTCATTGGAAAAATTTCGGGATGAAAGCAGGAAGACAGTTCTACGGCTCGTTGATATGGAGGCTAGCTATCTAACAGTGGAGTTCTTCCGGAAGATTAATGATGAGCCAAATCGAACTGGTCCAAATGCCGAAAAGGAGAAGGAAAAGGAAAAGAGAAAGGACAAGTTCCTTGACAATTTCTCAGACAATCACCTTAGGAAGATAGCTTCAAATGTAAGCTCGTACATCCAAATGATTCTTGATACACTAAAAAATTCGGTACCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCTAGGAGATCGTTACTTAACCAGTTTTATGTCCAAGTTGGGAAGAGAGAGAAGGAGCAATTGAGTGCCATATTGGATGAAGATCCAGTGCTTATGGAAAAGAGAGTACAGATTGCCAAAAGGCTTGAATTGTACAAGCAAGCCAGGGACGATATTGACTCGGTGGCTTGGAAATGA 1863 0.4278 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQQEYAEFLHAPRKRFTDFASVRKEISDETDRITGKTKQISNIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQSETIVEDIENMVRNYVEKPNCIILAISPANQDIATSDAIKLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKESEYFETSPEYGHLAHKMGSEYLAKLLSEHLEIVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFREHLDGGRPGGDRINGVFDHQLPAALKKLPFDRHLTINNVQRVVTEADGYQPHLIAPEQGYRRLIEGSISYFKGPAEASVDAVHFILKELIRKSISETEELKRFPTLQSDIAASANESLEKFRDESRKTVLRLVDMEASYLTVEFFRKINDEPNRTGPNAEKEKEKEKRKDKFLDNFSDNHLRKIASNVSSYIQMILDTLKNSVPKAVVYCQVREARRSLLNQFYVQVGKREKEQLSAILDEDPVLMEKRVQIAKRLELYKQARDDIDSVAWK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0152 620 FunFam dynamin-related protein 1E 4 310 - -
Acco12g0152 620 SMART GED_2 524 617 IPR003130 GO:0003924|GO:0005525
Acco12g0152 620 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Acco12g0152 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Acco12g0152 620 Gene3D - 4 310 IPR027417 -
Acco12g0152 620 FunFam Dynamin-related protein 1C 332 597 - -
Acco12g0152 620 PANTHER DYNAMIN 6 617 IPR022812 -
Acco12g0152 620 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Acco12g0152 620 ProSiteProfiles GED domain profile. 529 620 IPR020850 -
Acco12g0152 620 PRINTS Dynamin signature 225 244 IPR022812 -
Acco12g0152 620 PRINTS Dynamin signature 202 218 IPR022812 -
Acco12g0152 620 PRINTS Dynamin signature 60 77 IPR022812 -
Acco12g0152 620 PRINTS Dynamin signature 35 53 IPR022812 -
Acco12g0152 620 PRINTS Dynamin signature 133 150 IPR022812 -
Acco12g0152 620 PRINTS Dynamin signature 183 201 IPR022812 -
Acco12g0152 620 Pfam Dynamin GTPase effector domain 527 617 IPR003130 GO:0003924|GO:0005525
Acco12g0152 620 Pfam Dynamin family 38 213 IPR045063 -
Acco12g0152 620 Pfam Dynamin central region 222 489 IPR000375 -
Acco12g0152 620 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Acco12g0152 620 Gene3D Dynamin, middle domain 334 597 - -
Acco12g0152 620 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0152 Acco-ChrAcco12 1322609 1330281 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0152 12 1322609 1330281 Acco12g0152 12 1322609 1330281 ECH