Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0146 ATGGAAGAAGAAGGGCAAGGATTTGCACTGACCCAGATGAGGAAATCAGTTGAGAAGCTTGGTTCTTCTGCTGAGATGTATGGGGATCCAACACTTACGAGGTTCTTGATTGCTCGATCAATGGACCCGGACAAAGCAGCTAAGATGTTTGTTCAGTGGCAGAAGTGGAGGGCAAAGATGGTGCCCAATGGATTCATTTCAGAATCTGAAGTTCCAGATGAATTGGAGGGTAGAAAAATCTTTTTGCAGGGTCTCTCCAACAATACATACCCTGTGATGATCGTCCAAGCTAGGAAGCATTTTCCTCCCAAGGATCAGAATCAATTCAAGAAATTTGTTGTTCATTTACTAGACAAGACAATTGCTAGTGCTATCAAAGGATGCGAAACGGGAAATGAAAAGTTGATTGGGATCCTTGATCTGCAGCATATCACATATAAAAACATTGATGCTCGTGGCTTAATCACAGGATTTCAATTTTTACAGGCATACTATCCTGAGCGTCTGGCAAAGTGCTATCTATTACACATGCCACCGTTTTTTGTGGCGGTTTGGAAACTAGTTTCTCGGTTTCTAGAGAAAGCTACACTTGAAAAGGTTGTGATAGTAAGCAGTGAGGAGGAGAGGAGAGAGTTTGTGAGAAGGGTGGGAGAAGAGATTCTGCCACAAGAGTATGGGGGACGAGCCAGGCTTGTGCCTCTTCAAGATGCTCCTCTGCCCAATGCTCCAACGAATTCTTGA 741 0.4386 MEEEGQGFALTQMRKSVEKLGSSAEMYGDPTLTRFLIARSMDPDKAAKMFVQWQKWRAKMVPNGFISESEVPDELEGRKIFLQGLSNNTYPVMIVQARKHFPPKDQNQFKKFVVHLLDKTIASAIKGCETGNEKLIGILDLQHITYKNIDARGLITGFQFLQAYYPERLAKCYLLHMPPFFVAVWKLVSRFLEKATLEKVVIVSSEEERREFVRRVGEEILPQEYGGRARLVPLQDAPLPNAPTNS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0146 246 SMART sec14_4 74 230 IPR001251 -
Acco12g0146 246 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 68 233 IPR001251 -
Acco12g0146 246 SUPERFAMILY CRAL/TRIO domain 69 230 IPR036865 -
Acco12g0146 246 SUPERFAMILY CRAL/TRIO N-terminal domain 6 66 IPR036273 -
Acco12g0146 246 CDD SEC14 81 227 IPR001251 -
Acco12g0146 246 PANTHER OS03G0850700 PROTEIN 6 236 - -
Acco12g0146 246 Gene3D - 3 235 IPR036865 -
Acco12g0146 246 Pfam CRAL/TRIO domain 76 227 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0146 Acco-ChrAcco12 1281405 1286699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0146 13 204 Acyl Lipid Metabolism Gene Families AT5G47730 23.810 5.77e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0146 12 1281405 1286699 Acco12g0146 12 1281405 1286699 ECH