Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0087 ATGAGGCTCTGGCAGAGACTCGCCGGAGCTCTGAAAGACAAGAACAGCGTGTGGGCGGCTCAGCTGTCTCGCCGCACCTCCTTCCACAACCCCGATCTGGAAACCGCCGTCATCAAAGCCACCAGCCACGATCGATATCGCATCGATTGCAAGAACGTTCAACGTGTCTTCCAATGGGTTCGCACCTCTCCTCTTTACATCAAACCCCTAATCTGGGCTCTCACCATGCGAATGCAAAAGACTCGAAGCTGGATCGTCGCTCTCAAGGGTTTGATGCTCATGCACGGCATTTATTGCTGTGATCTCGCCGCTATCCGAAAGATGGGTCGATTGCCCTTCGATCTCACCCATTTCTGCGATGAGCATCTCGATCCATATAAGGCTTTTGCTTATAACGCCTTTGTTCATTCCTATTTTGCGTATTTGGACCAAAAATCCGCCTTCGTATGCATGGAATTTCATAAACAGAACAAACAGGGCAAGAAAAGAGAGGAAACGTTGATTGAAGAATTGGAGAAATTGCAGGCCATGCAGGATTTGATTGACATGCTGCTTCGGATTAAACCTGATCATTTGAATTCGCGTGAGGGTCTCGTTCTGGAAGCCATGGATTGCGTCATTGTGGAGCTTTTCGACGTGTACAGTAAATTCTGCAAAGGGATTGCTCGAGCTCTGTTGAGGATATATGATATTGGCGGGAAAATGGAGGCTAGTGTTGGGCTTAAGGTTCTGCAGAAAGCAGCAATCCATAACGGTCAGCTTTCTATATACTTTGATTTCTGCAGGGAAATTGGAGTCCTCAACGCTTCTCAATGCCCCAAAATGGAGCGATTCCCTGATGGGTATATCCAAGATCTGGACAGAATCATTAATGGGGTTGATGAGAAGGAAAACTTGCAGGGTGATCATCATGAAGAAGACAAGGCCATTGTGCCCTGTGTTAATGCTATTGTGTGCAAGGATGAACACAAGGGATCAGATGGTTTGAAGACGGTAATTACAGAAAAGTGGGAGATTTTTGATGATCAAATGATGTTTGATGATAGAACAAAGCCACCTTTCTCAACCAACCCTTTTGAGGATTCAGATACATATAGCATCGTTCCCTACCATGCAGTTCATAACCATGTTCTTCCGGATTTAATTAGTTTTTAG 1155 0.4563 MRLWQRLAGALKDKNSVWAAQLSRRTSFHNPDLETAVIKATSHDRYRIDCKNVQRVFQWVRTSPLYIKPLIWALTMRMQKTRSWIVALKGLMLMHGIYCCDLAAIRKMGRLPFDLTHFCDEHLDPYKAFAYNAFVHSYFAYLDQKSAFVCMEFHKQNKQGKKREETLIEELEKLQAMQDLIDMLLRIKPDHLNSREGLVLEAMDCVIVELFDVYSKFCKGIARALLRIYDIGGKMEASVGLKVLQKAAIHNGQLSIYFDFCREIGVLNASQCPKMERFPDGYIQDLDRIINGVDEKENLQGDHHEEDKAIVPCVNAIVCKDEHKGSDGLKTVITEKWEIFDDQMMFDDRTKPPFSTNPFEDSDTYSIVPYHAVHNHVLPDLISF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0087 384 SUPERFAMILY GAT-like domain 163 292 - -
Acco12g0087 384 CDD ANTH_N_AP180_plant 33 148 - -
Acco12g0087 384 FunFam Putative clathrin assembly protein 7 153 - -
Acco12g0087 384 Gene3D - 8 153 IPR008942 -
Acco12g0087 384 SUPERFAMILY ENTH/VHS domain 32 148 IPR008942 -
Acco12g0087 384 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Acco12g0087 384 Gene3D ANTH domain 154 304 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Acco12g0087 384 Pfam ANTH domain 32 290 IPR011417 GO:0005543
Acco12g0087 384 Coils Coil 157 177 - -
Acco12g0087 384 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 304 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0087 Acco-ChrAcco12 758282 759436 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0087 12 758282 759436 Acco12g0087 12 758282 759436 ECH