Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0026 ATGGAAAGCCACAGGTGGAAAGAATACAATGGAAATAACCACCAGTTTTTGTCTGAATATGATGATCTCGTCTTAGATCGATGCATATCCAATAGAGAGCATAGCTCGCCCCTTCCACACACTGCATTTCCTCCTAGCCTAGGCTACATCCAACACCCAGTCTCAAAATTGGATACTCTCGCTGGAATCGCAATCAAGTACGGCGTCGAGGTATCAGACATCAAAAAAATGAATGGCCTCGTTACAGACCTTCAGATGTTTGCTCTTAAAACTCTTCACATCCCACTTCGGGAAAGACACCCTACATCAGATGATTCTACTACCTCAGGAAACAGAACACCAGATGAGTTGGTTGATTCGCAACATTCTTTGACAACGAATTCTCCCCAGCGGAGGGCCTCCCCCGTTGGGAACTCTTTGCAAGGTTTCTATAGAATAAAACCAATGGACAAGAAAACCATATCCGATGACTTGCAGGTGGCAGGGAACCGAAAAGGAGCTACTAATTTCTCCAGAGACTCAGCTTCGCCCCTCCAACCTCCGAGTGGTCACCGAAAATCCAAAAGTCTAGTTGATATCATTTTGAGTGAGATTAAGGAGCAGCATGATATTGTGCCCGCTGCACGGGAGACGCTCTTGAGGGAGGATAATAGCAGCAGCTGTGGATTCCCATCAAGAACAGGAAAAGGTTTGGCTCTCAGACAGAAATCAGCAAGCCGAGCTTCATTAATCACAGATTCTGAAGCTAGTGGCTCAAATTCTGGGTCACTTGGTTTGGAGGATATATTCCGAACTTTTGGTACCCTTGGTGTTAAGAAATCATCGAGCGCATCATGCTTACATGACGAGGGTAGTAGCCCCACATCTGTCTGGCCAACCTCAAAAAGGAGTTTGAGATCAGATTTTCAGGCCTTTGCGACTGCAAAACCAATATTTGATGGCTTGCCCAAACCCACAACCGGTCGCAGAAATAAAGCTGCACTTGATAAACATATATAG 999 0.4555 MESHRWKEYNGNNHQFLSEYDDLVLDRCISNREHSSPLPHTAFPPSLGYIQHPVSKLDTLAGIAIKYGVEVSDIKKMNGLVTDLQMFALKTLHIPLRERHPTSDDSTTSGNRTPDELVDSQHSLTTNSPQRRASPVGNSLQGFYRIKPMDKKTISDDLQVAGNRKGATNFSRDSASPLQPPSGHRKSKSLVDIILSEIKEQHDIVPAARETLLREDNSSSCGFPSRTGKGLALRQKSASRASLITDSEASGSNSGSLGLEDIFRTFGTLGVKKSSSASCLHDEGSSPTSVWPTSKRSLRSDFQAFATAKPIFDGLPKPTTGRRNKAALDKHI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0026 332 MobiDBLite consensus disorder prediction 313 332 - -
Acco12g0026 332 Pfam LysM domain 54 95 IPR018392 -
Acco12g0026 332 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 36 254 IPR045030 -
Acco12g0026 332 CDD LysM 58 94 IPR018392 -
Acco12g0026 332 MobiDBLite consensus disorder prediction 98 142 - -
Acco12g0026 332 MobiDBLite consensus disorder prediction 166 187 - -
Acco12g0026 332 MobiDBLite consensus disorder prediction 166 183 - -
Acco12g0026 332 SUPERFAMILY LysM domain 50 95 IPR036779 -
Acco12g0026 332 MobiDBLite consensus disorder prediction 106 137 - -
Acco12g0026 332 ProSiteProfiles LysM domain profile. 50 94 IPR018392 -
Acco12g0026 332 Gene3D LysM domain 41 110 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0026 Acco-ChrAcco12 347529 349855 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0026 12 347529 349855 Acco12g0026 12 347529 349855 ECH