Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2469 ATGGCGAGCATAAGGCCTTTGCCCGATGATGTTCGTAGTTCGTTGCGTTCTGGCATTTTCTTGTTCGACTTGACGAGGGTTGTGGAAGAACTGGTTTTTAATAGCCTGGATGCCGGTGCAACGAAGGTCTCAGTCTTTGTTAGTGCCAGGAGTTGTTACATCAAAGTAGCGGACGATGGAGTTGGTATTACTCGAGACGGATTGATGTTGGTTGGAGAAAGATACGCAACATCAAAGTTACTTAGTTTGGTTGATCTGAGTGGCACAAGTGGAAACTTTGGTTTTCGAGGGGAAGCTTTAGCTTCGATTTCAGAAGTTTCCCTGTTGGAAATTTTGACGCGAACTTTTGGAAGGGCAAATGGATATCGCAAAGTATTGAAGGGCTGCAAGTGTCTCTATCTTGGTATAGATGATGATAGAAAGGAAGTGGGAACAACAGTTGTTGTCCGTGATTTATTTCACAACCAACCAGTTCGGAGGAAACATATGCAATCCAGCCCAAAGAAGGTTCTGCAATCAGTCAAGAAAAGTATGCTGCGGCTCGCACTTGTCCGTCCAAATATTTTGTTCAAAGTTGTTGATATTGAAAGTGAGGATGAACTTCTTTGCACACATTCTTCTTCTTCTCCACTGCCACTTTTAACCAGTGGCTTTGGGATGGAGGTCTCAAGCTCTCTTAATGAATTACAAGATCAAGATGATCTCATAAAGCTTTCAGGATATATATCTGGCCCCTGCAACAGTTTTACTCTGAAGGCCTTGCAGTATGTCTGTATCCATTTCATCAACAAAGGCCCAATTCATAAGCTTCTAAGTCAACTGGCTGTTAGGTTTGAGCATCTGGATTCACGGAATGCAGGTGACAAGTTCCAGAACAAGAAGAGAAGTAGATCTCAAGCATATCCAGCTTATATCTTGAATTTGCTCTGTCCACGATCTCTGTATGATTTAACCTTTGAGCCATCAAAGACTTCTGTTCAATTTAAGGATTGGACTTCCATACTGAACTTCGTCGAGAAGGCCATCAAAAATTTCTGGGGGAAGAACATAACTCATGGAGAGTCTTCTAATGCCACTCATGTGGTACAAGCAGCTCAACTGTGCAAGGAAATTGACAATGCCATTTTGGCTGAAGCAGATATAGCGAATCGTGGAAACCAAAAGAGTATAGAATTCATTGACCTTTTCTTTTCCCCTTCAGACAAGTTAGCTGAAGATGACCATTGCCTATCTGATGGGCAAGTCATTAGATCCTCCCTTTATTATTTGCCCAGTGATGATACAAAGTTCAAAGAGAAACAAAATAAGGGAGACTTTCTATGTCAGACTGGTTACTCTAGCTTTTCAATGGATGAATCATATGACAAGTGTGGCTCCACTGTGACTAAAAATCATTGCAGTATGTGGAATGATAACAACTGTCTATCTGGAAGAGATGATTTCTTGGATGGTGAGTTTGTTGCTGGAGGAATCCTCAATGATAATGTATCATTTGATGCACCAAGCTCATCAAAGGGAAATAAATTTTTTGAAGTTGATGATGATGTGCTCAGTGAATTGTCCCAAGGTGCCCTGGATTATGGCTGTCATGAGCTCTGTAACGATGTAGTGATTGACAGGGATTTTCAAAAGCCTTTTCTGAAGAGTTGCTCTATACGAGGTAGTATTCTGCAAGAGAGGGCCTTGGATGCAAATAAAGAACATGTGTTTCAAATTGATGGCTCTAGCACCAAACAAGATCTGAGAGCATGCAGGGGCAGATTTGAGAACTTAGGTGCACATCCTTGTCCAGAAGTTGTAGAAATATTTAACACATCCAGAGATTCTGTTTTTCTCTCAAGAGCATCTACTGAAGAAAAATGTTTTCCTTCAGATTCATGCTCTTTGGCAACACAAATGGGATGCCCTGGGTCTGCTGAAGAAAAGTGTTTTCCTTCAGATTCAAACTATCCAGAGTTGTTGACACTTGAACGTTACCCTGCCTTCAAGGCGCTATTACCTGAAGCCACTGCATGGGATGTTGATCATATGACAGGCACTGATCTTGATGTTCTTGGAGGAATACCTGGATGCTACAAATGGGGTGGTTATAAAAGAATTTTAGATGATAAAGAAAATAGGTGCAATTTTAGTGGTCATATCTCATACAGCTTCAAATCAGATCAGTGCATGAGAAGTATTGGAAACAATAAACTGCATTTTAGTGATCCCAATGACTGTAACAATTTAAATTTTACCAAATGGCCTGATTGTTATGATATAGATTCCAACAAATGGTCAGATATTTTAACAGATGAGTCAGACTGGTTGTGTCCAGTGTCATGTGGTGAGAACTACCAAAGACTTAGCAAGAACAGAATCAAAAGGGATCATGTTAGATATCCTGCTTCAGAAAAGAATCATGAAAGATCTAGGAGAAGCTTTTCAGCCCCTCCATTTCACAAAAGCAGAAGAAGGTTTAATTCATTAAATCAACCTTTGACTTTGATATCCAAAAGACCTGCGGGCCAAACCTCCAACTGTGCGTTAAAGAATAGAGAATTGGCAGAAGCTGATGAAGAGTGTCCCCAGCGATATTCTGGACCACGTCACCCAACCCCTGAGGAAGATCTGTTGCTTGAAAATAATGCCAGTATGAAGAAGAAAACAGCTACTCTGGGAGATATACAGCAGGTTAATAGCAAAGAAGAGTCTGAATGGTTTGGAAGCTCAGATAGTCAAAGCAATGGTCCACTAAAAGTGATTGTGACCATTCCACAGACAAGGGATAAATCTCTTGATTTTCATAGTCAAGATGATATACTTGACATATCTTCTGGATTGTTGCATCTTGCTGGTGATTCATTAGTACCTGAAACTATCAGTAAGAGCTACCTTGAGAATGCCAAAGTTCTTCATCAGGTGGATAAGAAATTCATTCTTGTTGTGGCTGGCAGAACCCTTTCTGTTATTGATCAGCATGCTGCAGATGAGAGAATCCGATTGGAAGAATTGCGTCAAAAGGTATTATCAGGAGAAGCAAGGACAATAAACTATCTAGATACTGAACAGGACCTGGTGCTGCCTGAGATTGGCTATCAACTATTGCACAGTTATTCTGAACACATTAAAGTTTGGGGATGGATCTGTAACATTCATGCTCAAGATTCAAAATCCTTCAAGCAGAATTTGGATATTCTCAACAGGCAGCCAGCTGTTGCATCACTTATTGCGGTACCCTGCATTTTAGGTGTCAACTTAAACGATATTGATCTTATGGAATTTCTTCAGCAGCTTGCGGACACGGATGGATCATCAACAGTGCCACCCTCTGTTGTACGAGTTCTTAATTCCAAAGCGTGCAGAGGTGCAATTATGTTTGGAGACTCGTTGCTGCCATCTGAATGTTCGCTCATCGTTGAAGAGCTAAAACAAACGTCACTTTGTTTCCAATGTGCTCACGGGCGGCCAACAACTGTTCCTCTTGTCAACTTGGTGGCGCTGCATAATCAGATGGCCAAGCTCGGACCAATCATTGATTGCTCAAATGATGAGTGGCATGGACTACGAAGACATAAAGTTAGTGTTCAGCGTGCTGCACAACGTTTATGTTCCTCTAAAAAATAG 3606 0.4113 MASIRPLPDDVRSSLRSGIFLFDLTRVVEELVFNSLDAGATKVSVFVSARSCYIKVADDGVGITRDGLMLVGERYATSKLLSLVDLSGTSGNFGFRGEALASISEVSLLEILTRTFGRANGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFHNQPVRRKHMQSSPKKVLQSVKKSMLRLALVRPNILFKVVDIESEDELLCTHSSSSPLPLLTSGFGMEVSSSLNELQDQDDLIKLSGYISGPCNSFTLKALQYVCIHFINKGPIHKLLSQLAVRFEHLDSRNAGDKFQNKKRSRSQAYPAYILNLLCPRSLYDLTFEPSKTSVQFKDWTSILNFVEKAIKNFWGKNITHGESSNATHVVQAAQLCKEIDNAILAEADIANRGNQKSIEFIDLFFSPSDKLAEDDHCLSDGQVIRSSLYYLPSDDTKFKEKQNKGDFLCQTGYSSFSMDESYDKCGSTVTKNHCSMWNDNNCLSGRDDFLDGEFVAGGILNDNVSFDAPSSSKGNKFFEVDDDVLSELSQGALDYGCHELCNDVVIDRDFQKPFLKSCSIRGSILQERALDANKEHVFQIDGSSTKQDLRACRGRFENLGAHPCPEVVEIFNTSRDSVFLSRASTEEKCFPSDSCSLATQMGCPGSAEEKCFPSDSNYPELLTLERYPAFKALLPEATAWDVDHMTGTDLDVLGGIPGCYKWGGYKRILDDKENRCNFSGHISYSFKSDQCMRSIGNNKLHFSDPNDCNNLNFTKWPDCYDIDSNKWSDILTDESDWLCPVSCGENYQRLSKNRIKRDHVRYPASEKNHERSRRSFSAPPFHKSRRRFNSLNQPLTLISKRPAGQTSNCALKNRELAEADEECPQRYSGPRHPTPEEDLLLENNASMKKKTATLGDIQQVNSKEESEWFGSSDSQSNGPLKVIVTIPQTRDKSLDFHSQDDILDISSGLLHLAGDSLVPETISKSYLENAKVLHQVDKKFILVVAGRTLSVIDQHAADERIRLEELRQKVLSGEARTINYLDTEQDLVLPEIGYQLLHSYSEHIKVWGWICNIHAQDSKSFKQNLDILNRQPAVASLIAVPCILGVNLNDIDLMEFLQQLADTDGSSTVPPSVVRVLNSKACRGAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLVALHNQMAKLGPIIDCSNDEWHGLRRHKVSVQRAAQRLCSSKK 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2469 1201 SMART DNA_mis_repair_2 214 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Acco11g2469 1201 FunFam MUTL protein homolog 3 1008 1119 - -
Acco11g2469 1201 Gene3D - 2 208 IPR036890 -
Acco11g2469 1201 MobiDBLite consensus disorder prediction 790 817 - -
Acco11g2469 1201 Gene3D - 967 1155 IPR042120 -
Acco11g2469 1201 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 22 200 IPR036890 -
Acco11g2469 1201 Pfam DNA mismatch repair protein, C-terminal domain 217 344 IPR013507 GO:0005524|GO:0006298|GO:0030983
Acco11g2469 1201 MobiDBLite consensus disorder prediction 790 809 - -
Acco11g2469 1201 Pfam MutL C terminal dimerisation domain 963 1124 IPR014790 GO:0005524|GO:0006298
Acco11g2469 1201 NCBIfam DNA mismatch repair endonuclease MutL 4 349 IPR002099 GO:0005524|GO:0006298|GO:0030983
Acco11g2469 1201 SUPERFAMILY Ribosomal protein S5 domain 2-like 198 347 IPR020568 -
Acco11g2469 1201 SUPERFAMILY DNA mismatch repair protein MutL 963 1155 IPR037198 -
Acco11g2469 1201 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 118 - -
Acco11g2469 1201 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Acco11g2469 1201 SMART MutL_C_2 964 1124 IPR014790 GO:0005524|GO:0006298
Acco11g2469 1201 Gene3D - 1008 1119 IPR042121 -
Acco11g2469 1201 FunFam DNA mismatch repair endonuclease MutL 1 211 - -
Acco11g2469 1201 Gene3D - 215 351 IPR014721 -
Acco11g2469 1201 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1159 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2469 Acco-ChrAcco11 37756037 37765439 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2469 11 37756037 37765439 Acco11g2469 11 37756037 37765439 ECH