Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2467 ATGCGTGTGGTGTCCTGCACAACTGAACGCATCAATGCTCGGTTAGAAAACAGGGAATGTATTACGCACGACGGAGAGAAACCAGAACAAGGGCAATCAACTGCTCTGGTTTCGGTTATCACAAAGCAATTGCCGATCTGGAGTCGCTGCTTCACTCATCTGCATCTCGCAATGTTCGTCAGGAAGCTCGTCGAGAAAGCCTCCGTCAGGAAGCCTGGTGGGAATTCAGATGGGTTAAAAGCCAGCGATTTAGACGCACGTTTGGTTTTTCACTATGGGGTCCCATCCAACGGCGCCAAATTAGCTTATGACAATAATCAGAAGATTCTTGCTCTCTCTACAAAGGATGGCAGAATTAAACTATTTGGAAAAAATAACACTCAAGCCATCCTCCAATCTCCTGAGCCAGTGCCTAGCAGGTTTCTACAGTTCATCCAGAATCAAGGCATCCTTATTAATGTCAGTCTCAATAACCATATTGAGGTCTGGGACATTGACAAGAAGCAGTTGGTTGATGAATACGTCGTTAAAGAAGAAATTACGTCCCTTGCTGTCATTCAGCATAGCTACTACATGTACATTGGAGATTCTGTTGGCAATATTTCAGTTTTCAGCTTGGACCAGGAACCCTGGCGGATAGTCCAGATGAAATACATCATCCCGCTATCAGCTTCTTATGGGAGTCCAACTGAATTGTCAGATGATACTGCTGTGACACATATATTGCCTCAACCAGCAGCTGAAAGCAAGAGGGTTCTCATAATTTTTAGAAACGGCCAAATAATATTATGGGATATTCAAGAAAGCAAATCTATCTTCAGAACTGGTGGAAACATATCACAAGCATCCTATAATGAAGCTAAGAAAGCGACTTCTGCATGCTGGGCATGTCCTTTTGGAAGTAAAGTGGTTGTAGGGTACAGCAATGGAGAGCTTTTAATTTGGAATATCTCTTCTCAAAACGTTGGGAATGATTCAGCATCTGATTATACCACTCAAAACAATCCTACGTTCAAGCTTAACCTAGGATATAAATCAGATAAAATTCCCATTGACTCGGTTAAATGGGTATATGCGGAAGGAAAGGCAAGTCGACTTTATGTCATCGGAGCTTCTGACACTGCATCTCCAAACTTAGTCCAGATAGTGTTACTGAATGAGAAGACAGAATCTCGCACAATTAAGCTGGGCCTTCATCTGGCTGAATGTTGTATTGACATGGAGGTCTTGTCAACTTCAAGTGAGCAAAGCAAGCAGAAACAGGATTCTTTCATTTTGCTTGGGAAATCAGGCCGTGTTTATGTGTACGATGATAGTTTGATCGAAAGGTATCTTCTACAATGCCAGTCTAAGTCCTCGCCCTCGCTGCCGAAGGAAGTGATGATTAAGTTGCCACTGTCAGATTCAAGCATCACGGCAGCAAAGTTCATCTCAGAAAATCCTAATCTCCGAAATCCCGATGATGAGGAATATGTTCAGCTTCTGAAAAAGTACCCACCTCTTATTCCCACTGAAGCAAAACACAAAGAAATGGCTATTCTGAATTATTCCAACTTCACCGGATTTTCAAAAGTCAAAAACTTGTATATAACTGGCCACAGTGACGGAGCCATAACTTTCTGGGATGCGTCGTGTCCCCTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAACAGGAGTTTTCCCCAAGTGGCATACCCTTAACAACGTTATATTTTGATACCAACACGCCTCTTCTTGTTTCTGGAGATCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGAACCTTATTCAAGCAACAGCTTCATATCTCTTACGGGAAGCACAAAAAAAGCTACTGATCATATAATTCACAGTGTGAAACTTGTAAAGACTATTGGTGCTGTACTATCCATGAACATAGATCACGGCTCAAATCATCTTGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATTGATATGAATGGCTCAACTTTGTTATATCAGAGACAGATCACAAGTGAGATTAGTACCGGTATCATCTCTCTACAGTTCCGACCATGCAGTTTGCAGGGTTTCAAGAAAAACGTTTTAGCTGTTGGAACAAAGGATTCATCTGTTTTGGCACTTGATAGTGATACTGGAAACCAAATGAGCACTGACACTATTCATCCTAAGAAGCCGTCTAGAGCTCTACTAATGCAAGTATATGATGGACAAGGAGAATTAACCAAGGGATTGGGTACAAGCGAGGAGAATGATATTGATGATGCAACAACAAAGCAATTGTGCGTTTTATTGTGTTCTGAGAAAGCTTTGTATGTCTATTCTTTTGTGCATGTTGTTCAGGGTGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCGTCCTGTTGCTGGGCGTCCACATTCTACAGTCATTCTGATATTGGACTTATTCTCCTTTTCACCAATGGAAAATTAGAACTGAGGTCTTTGCCAGAATTGTCCCTGATCGTGGAGACCTCAATAAGAGATTTCACTTATTCACCTCCGAAATTAAAGTCATTTTCTGATAGACAAATGTGCTGTACATCCGAAGGAGATCTTGTTATGGTGAACGGTGACCAGGAAATTTTGGTTGCCTCAATGTTGGCCAACAGGGATGTTTTCAGGCTTTTGGACTGCGTCAGCTGTATCTATGGGAAAGAAATATCACAAGAAGACATTTTCCCGGCCCCAGTAATCCATAAGGAAAAGAAAAGGGGTATATTTAGTTCTGTTATCAAAGATTTTACTGGAAGTAAAGAAAAGCATGTGACCCTTTTGGAAACAGAAGACACGAAAGAAAGCACACAGCAACTCTCAGTTATCTTTTCTAATGCAAATTTTCCGAGTGATGGTGGCAATAAAGATAACTTTACCATGGATGAGGATGAGCTAGAGTTAAACATAGACGACATTGACCTGGATGATCCTGGAGAAAAACGCAAAGATCAAAGGATACTGGGAACTCTCAATAAGAAGAATTTGGCTGGCAAATTTCAGGCTCTAAAAGGCAAGTGGAAAGACATGAAGGGCAACGTTCAGAAAACATCAGACAAGGAAGAGCAACAGGATGAGAAAGGTGGTGCAGTTGATCAAATCAAGAAAAAATATGGGCATTCTTCTTCCTCCGATGAAACAAGCACTGCTAAATTGGCACATAACAAGTTGCAGGAAAACATGTCGAAACTGCAGGGTATCAACCTTCGAACTACACAAATGCAGGATACAGCAAAATCATTTTCATCATTGGCAAAACAGGTCCTGCGAACTGCCGAACAGGACAGACGTTGA 3312 0.4146 MRVVSCTTERINARLENRECITHDGEKPEQGQSTALVSVITKQLPIWSRCFTHLHLAMFVRKLVEKASVRKPGGNSDGLKASDLDARLVFHYGVPSNGAKLAYDNNQKILALSTKDGRIKLFGKNNTQAILQSPEPVPSRFLQFIQNQGILINVSLNNHIEVWDIDKKQLVDEYVVKEEITSLAVIQHSYYMYIGDSVGNISVFSLDQEPWRIVQMKYIIPLSASYGSPTELSDDTAVTHILPQPAAESKRVLIIFRNGQIILWDIQESKSIFRTGGNISQASYNEAKKATSACWACPFGSKVVVGYSNGELLIWNISSQNVGNDSASDYTTQNNPTFKLNLGYKSDKIPIDSVKWVYAEGKASRLYVIGASDTASPNLVQIVLLNEKTESRTIKLGLHLAECCIDMEVLSTSSEQSKQKQDSFILLGKSGRVYVYDDSLIERYLLQCQSKSSPSLPKEVMIKLPLSDSSITAAKFISENPNLRNPDDEEYVQLLKKYPPLIPTEAKHKEMAILNYSNFTGFSKVKNLYITGHSDGAITFWDASCPLFIPILQLKQQSEQEFSPSGIPLTTLYFDTNTPLLVSGDQSGMVRIFRFKPEPYSSNSFISLTGSTKKATDHIIHSVKLVKTIGAVLSMNIDHGSNHLAVGSDQGYVSVIDMNGSTLLYQRQITSEISTGIISLQFRPCSLQGFKKNVLAVGTKDSSVLALDSDTGNQMSTDTIHPKKPSRALLMQVYDGQGELTKGLGTSEENDIDDATTKQLCVLLCSEKALYVYSFVHVVQGVKKVLHKKKFHSSSCCWASTFYSHSDIGLILLFTNGKLELRSLPELSLIVETSIRDFTYSPPKLKSFSDRQMCCTSEGDLVMVNGDQEILVASMLANRDVFRLLDCVSCIYGKEISQEDIFPAPVIHKEKKRGIFSSVIKDFTGSKEKHVTLLETEDTKESTQQLSVIFSNANFPSDGGNKDNFTMDEDELELNIDDIDLDDPGEKRKDQRILGTLNKKNLAGKFQALKGKWKDMKGNVQKTSDKEEQQDEKGGAVDQIKKKYGHSSSSDETSTAKLAHNKLQENMSKLQGINLRTTQMQDTAKSFSSLAKQVLRTAEQDRR 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2467 1103 SMART WD40_4 277 316 IPR001680 GO:0005515
Acco11g2467 1103 SMART WD40_4 507 542 IPR001680 GO:0005515
Acco11g2467 1103 SMART WD40_4 167 205 IPR001680 GO:0005515
Acco11g2467 1103 SMART WD40_4 555 594 IPR001680 GO:0005515
Acco11g2467 1103 SMART WD40_4 622 657 IPR001680 GO:0005515
Acco11g2467 1103 FunFam Syntaxin-binding protein 5 isoform A 79 238 - -
Acco11g2467 1103 Pfam Lethal giant larvae(Lgl) like, C-terminal 778 880 IPR013905 -
Acco11g2467 1103 Gene3D - 93 439 IPR015943 GO:0005515
Acco11g2467 1103 MobiDBLite consensus disorder prediction 1015 1048 - -
Acco11g2467 1103 SUPERFAMILY WD40 repeat-like 101 659 IPR036322 GO:0005515
Acco11g2467 1103 Gene3D - 515 815 IPR015943 GO:0005515
Acco11g2467 1103 CDD R-SNARE_STXBP5_6 1039 1096 - -
Acco11g2467 1103 MobiDBLite consensus disorder prediction 1015 1056 - -
Acco11g2467 1103 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 58 1097 - -
Acco11g2467 1103 SUPERFAMILY WD40 repeat-like 522 862 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2467 Acco-ChrAcco11 37736073 37748101 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2467 11 37736073 37748101 Acco11g2467 11 37736073 37748101 ECH