Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2281 ATGGTTCACAGTGCCTACGATTCTTTCCAACTCCTCGACAATTGTCCTTCGAAGATCGAAGCTGTCGAATCTTATGGCTCTAAGCTCCTCCTGGGCTGCTCTGATGGCTCCCTCCGAATATACGCTCCAGAATCATCTGATTCCGATCCGTCTCCGTCGGCCGATCAACAAGCTCAGGAGCTGCGGCAGGAAGCCTACGTTCTCGAAAGAAATTTGACTGGCTTTGCGAAGAAGCCTATCTTATCAATGGAGGTCTTGGAATCCAGGGAATTACTACTTTCACTTTCCGAATCTATTGCTTTTCATCGTCTTCCTAATCTTGAAACCATAGCAGTCATCACCAAGGCCAAGGGCGCCAATGTGTTCTCCTGGGATGAACGAAGAGGTTTCTTATGCTTTGCGAGGCAAAAGAGGGTCTGTATTTTCAAACATGATGGTGGCAGAGGGTTTGTGGAGGTGAAAGAATTTGGTGTTCCGGATGTGGTGAAGTCGATGTCTTGGTGCGGTGAAAATATATGTCTGGGGATTAGAAGAGAATATGTAATACTGAATGCTACAAATGGTGCATTGTCTGAGGTATTTACCTCTGGGAGACTAGCGCCGCCTTTAGTGGTCTCTCTACCTTCAGGGGAACTTCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGACCAAAATGGGAAACTTCTTCCAGAAGGCAGGATTTGTTGGTCGGAGGCTCCTGCAGAAGTTGTAATCCAGAAACCATATGGAATAGCCCTGCTGCCAAGATTTGTAGAGGTTCGATCCCTTCGAGATCCATTTCCACTTATACAGACTGTTGTTCTTCGAAATGTTCGTCATCTTTGCCAAAGCAACAATTCTGTGGTTCTTGCATTAGATAATTCTGTTCACGGACTCTTCCCTGTTCCTCTTGGAGCCCAGATTGTCCAATTAACAGCATCTGGCGACTTTGAAGAAGCTCTGTCATTGTGCAAACTCCTTCCACCTGAAGATTCAAATCTCCGTGCTGCAAAGGAGGGTTCAATTCATATAAGATATGCTCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCAATGGAACATTTTCTTGCATCTCAAGTAGATATAACTTATGTTCTTTCTCTGTATCCATCCATTATCCTTCCCAAGACAACCATTGTTACTGAGCTAGAGAACTTGGGGGACATTTCCTTGGATGCATCATATCTCTCTAGAGATTCTTCAGGTCTGTCAGATGATATGGAAACCCCACCACCACCTTTGTCAGAATCTGATGCAGCACTTGAATCCAAAAAGATGAGTCATAATATGCTTATGGCTCTCGTTAAGTTTTTGCAGAAAAAGAGATATAGTGTTATTGAGAAGGCCACTGCTGAAGGGACAGAGGAGGTTGTTTTAGATGCAGTTGGGGACAGCCTTGTATCCTATAACAGTAGCAGGTTTAAGAAAGCAAACAAGGGGCGTGTTAGTGTTCCTGTTAGTTCAGGAGCTAGGGAGATGGCTTCAATATTGGATACTGCACTTCTCCAAGCATTGCTTCTTACTGGACAATCTTCCTCTGCTCTTGAACTACTGAGAGTTCCAAACTACTGTGATTTGAAGATATGTGAAGAGATAATTCGTAAAGGCAGCAATAATGTTGCTTTACTAGAACTTTACAAGTGCAATTCAATGCACCGAGAAGCTCTTGAGCTCCTTCATCAGTTAGTGGAGGAGTCAAAGTCAAACCCATCTGAAGTTACACATAAGTTCAAGCCTCAGGCAATTATTGAGTATCTCAAGACTCTGTGTAATTCAGACCCCATGCTTGTTATGGAGTACTCAATGCTTGTTCTCGAAAGCTGTCCGACACAAACTATTGAGCTCTTTCTCTCTGGAAATATCCCTGCTGATATGGTGAACTCCTATTTGAAGCAACATTCTCCAAATATGCAGACTACTTACTTGGAACTCATGCTTGCAATGAATGAGAGTGCCATCTCTGGAAACTTGCAAAATGAAATGGTACAAATCTATCTTTCTGAAGTACTTGAGTGGCATGCTGATTTAAGTGCTAAACAGAAATGGGATGAGAAAGCTCTCTCCCTGACAAGGAAGAAATTATTGTCTGCTTTAGAGAGTATATCAGGATACAATCCAGAAGCTCTATTGAAATGTCTTCCACCTGATGCTCTATATGAGGAGCGTGCTATACTGTTGGGTAAAATGAACCAACATGAATTGGCACTGTCTTTATATGTTCATAAGCTTCATGTTCCAGAATCAGCTTTGTCTTACTGCGATCGGGTTTATGAATCTACAAATCATCCATCAGGAAAGTTTCCCAGCAACATATACCTATCTCTTCTGCAAATCTATTTAAATCCACGAAGGACAACCAATGGTTTTGAAAAGAGAATCATGAATCTATTATCTACCCAGAATGCAGGCATTTCCAAGGTTAGCCCTATGACATCAATAAGATCTAAAGCTGGCCGGGGAAGTAAAAAGATTGCAGCAATAGAAGGTGCAGAGGACACAAAAGTTGGTTTGAGCAGCACTGATAGTAGCCGGAGCGATGGTGATCTGGACGAAATAAGTGAGGACAGTGGTAGTACTATAATGCTTGATGAAGTCCTTGATTTGTTGAGTCGCAGATGGGATAGAATAAATGGAGCTCAGGCCCTCAAACTTTTACCAAGAGAAACTAAACTACAGAACTTGCGTCCATTTCTTGGACCTCTTGTACGAAAATCTAGTGAAATGTACCGTAATTACTCAGTGATCAAGAGCTTGAGACAAAGTGAGAACCTTCAGGTGAAAGATGAACTCTACAATCAGAGGAAAGCAACTGTGAAGATAACCGATGACAGCATGTGTTCACTTTGCCATAAGAAGATAGGGACTAGTGTATTTGCGGTCTACCCTAATGGAAAAACTCTCGTGCACTTTATCTGTTTCCGAGATTCTCAGAGCATGAAAGCTGTGGCCAAAGGGTCGTCATTGAGGAAGCGGATGTAG 3006 0.4265 MVHSAYDSFQLLDNCPSKIEAVESYGSKLLLGCSDGSLRIYAPESSDSDPSPSADQQAQELRQEAYVLERNLTGFAKKPILSMEVLESRELLLSLSESIAFHRLPNLETIAVITKAKGANVFSWDERRGFLCFARQKRVCIFKHDGGRGFVEVKEFGVPDVVKSMSWCGENICLGIRREYVILNATNGALSEVFTSGRLAPPLVVSLPSGELLLGKENIGVFVDQNGKLLPEGRICWSEAPAEVVIQKPYGIALLPRFVEVRSLRDPFPLIQTVVLRNVRHLCQSNNSVVLALDNSVHGLFPVPLGAQIVQLTASGDFEEALSLCKLLPPEDSNLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLASQVDITYVLSLYPSIILPKTTIVTELENLGDISLDASYLSRDSSGLSDDMETPPPPLSESDAALESKKMSHNMLMALVKFLQKKRYSVIEKATAEGTEEVVLDAVGDSLVSYNSSRFKKANKGRVSVPVSSGAREMASILDTALLQALLLTGQSSSALELLRVPNYCDLKICEEIIRKGSNNVALLELYKCNSMHREALELLHQLVEESKSNPSEVTHKFKPQAIIEYLKTLCNSDPMLVMEYSMLVLESCPTQTIELFLSGNIPADMVNSYLKQHSPNMQTTYLELMLAMNESAISGNLQNEMVQIYLSEVLEWHADLSAKQKWDEKALSLTRKKLLSALESISGYNPEALLKCLPPDALYEERAILLGKMNQHELALSLYVHKLHVPESALSYCDRVYESTNHPSGKFPSNIYLSLLQIYLNPRRTTNGFEKRIMNLLSTQNAGISKVSPMTSIRSKAGRGSKKIAAIEGAEDTKVGLSSTDSSRSDGDLDEISEDSGSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQNLRPFLGPLVRKSSEMYRNYSVIKSLRQSENLQVKDELYNQRKATVKITDDSMCSLCHKKIGTSVFAVYPNGKTLVHFICFRDSQSMKAVAKGSSLRKRM 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2281 1001 SUPERFAMILY WD40 repeat-like 25 179 IPR036322 GO:0005515
Acco11g2281 1001 ProSiteProfiles Citron homology (CNH) domain profile. 16 289 IPR001180 -
Acco11g2281 1001 Pfam Region in Clathrin and VPS 634 764 IPR000547 GO:0006886|GO:0016192
Acco11g2281 1001 PANTHER CNH DOMAIN CONTAINING 1 988 IPR032914 GO:0016192
Acco11g2281 1001 Pfam Vacuolar sorting protein 39 domain 1 506 614 IPR019452 -
Acco11g2281 1001 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 609 796 IPR000547 GO:0006886|GO:0016192
Acco11g2281 1001 Pfam Vacuolar sorting protein 39 domain 2 875 983 IPR019453 -
Acco11g2281 1001 Pfam CNH domain 26 284 IPR001180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2281 Acco-ChrAcco11 36383246 36389879 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2281 11 36383246 36389879 Acco11g2281 11 36383246 36389879 ECH