Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2274 ATGAAGGGGAGCGTGAAGTCTGCACAGGCGAACAGGGAGGATTGGAGGAAGGCAAAAGACTCTCAGAAAGCTTGCTCGGGATCGTGGTCCGATTGTGTTAGCGATATGTGGCGGTGCATTGCTCGTGGTCTTTCTGTACCCGCTTCCAAGAGATCGACTCCTAATGACTCTCTTCGATCTCACATTTCTAGATTTTTCTCTACTGGGGGAAACTCCTCCTACACTGTGGTGGATCATACTTATGATGCAATAGTTGTAGGCGCCGGGGGTGCAGGGTTGAGAGCTGCTATTGGACTCTCCGAACATGGGTTCAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCACATACTGTTGCAGCTCAGGGTGGGATAAATGCTGCATTGGGAAATATGACTGAGGATGACTGGAGGTGGCACATGTATGATACAGTCAAGGGAAGTGACTGGCTAGGAGATCAAGATGCCATCCAGTATATGTGCAGAGAGGCACCGAAAGCTGTCATTGAGCTTGAGAATTATGGATTGCCATTTTCCCGAACTGAGGATGGAAGAATATACCAGCGTGCATTTGGTGGTCAAAGCCTGAACTTTGGAAAAGGTGGCCAGGCATACCGTTGTGCATGTGCTGCTGATCGAACAGGACATGCTTTATTGCACACTCTCTATGGCCAGGCTATGAAACATAATACTCAATTTTTTGTAGAATATTTTGCACTGGATCTTTTAATGAACAATGATGGTAGTTGCCAAGGAGTAATTGCGTTGAATTTGGAGGATGGAACATTACATCGGTTCCAAGCTGCTTCAACTATTTTGGCCACAGGGGGTTATGGTAGAACATACTTTTCTGCCACCTCAGCGCATACATGCACAGGAGATGGTAATGCTATGGTTGCACGTGCAGGGGTCCCGCTTCAGGACTTGGAGTTCGTGCAATTTCATCCAACAGGTATATATGGAGCTGGTTGCCTGATCACAGAAGGTTCTCGTGGAGAGGGTGGAATTCTTAGGAATAGTGAAGGTGAGCGATTCATGGAACGATATGCTCCTACTGCGAAGGATCTTGCATCAAGAGATGTTGTTTCGAGATCAATGACTATGGAGATCCGGGAAGGTCGCGGTGTAGGACCTCTGAAGGATCACATCTATCTACATTTAAATCACTTACCCCCAGATGTGCTTAAGGAAAGGCTCCCTGGTATCTCTGAAACTGCTGCTATATTTGCTGGTGTGGATGTCACAAAGGAACCTATTCCTGTTTTGCCGACTGTACACTATAATATGGGTGGTATTCCCACCAATCATCACGGAGAGGTGGTTACTGTTAAAGGTGACAATCCAGATGCATTGGTACCAGGTCTGATGGCTGCTGGAGAAGCAGCCTGTGCGTCAGTTCATGGTGCCAATAGGCTTGGAGCTAATTCTCTTCTGGACATCGTTGTTTTTGGGAGAGCTTGTGCCAATAGGGTTGCAGAAATTCAAAGGCCAGGAGCAAAACAGAAGCCTCTGGAGAAGGATGCTGGTCAAAAGACAATTGCATGGCTGGACAAACTGAGAAATTCAAATGGTTCATTACCGACTTCAGAGATTCGATTAAATATGCAACGAATAATGCAAAATAATGCTGCTGTGTTCCGTACACAGGAAACATTGGAAGAAGGTTGTCAATTAATTGATAAAGCATGGGAGAGCTTTCATGATGTAAAGTTGAAGGACCGTAGTCTGATATGGAACACTGACTTGACCGAGACTCTTGAGTTGGAAAACCTTTTGATAAATGCCTGCATCACCATGCACTCGGCTGAAGCCAGGAAAGAGAGTAGAGGTGCACATGCTCGAGAGGACTTTACGAAAAGAGATGATGAGAATTGGATGAAGCACACATTAGGATATTGGGAGAATGAGAAGGTCCGTTTAGATTACAGGCCGGTGCACATGAATACATTGGATGATGAGGTTGAATCATTCCCTCCTAAAGCTCGTGTGTATTAA 1998 0.4565 MKGSVKSAQANREDWRKAKDSQKACSGSWSDCVSDMWRCIARGLSVPASKRSTPNDSLRSHISRFFSTGGNSSYTVVDHTYDAIVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGRIYQRAFGGQSLNFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNNDGSCQGVIALNLEDGTLHRFQAASTILATGGYGRTYFSATSAHTCTGDGNAMVARAGVPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTVKGDNPDALVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQRPGAKQKPLEKDAGQKTIAWLDKLRNSNGSLPTSEIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNTDLTETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEVESFPPKARVY 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2274 665 FunFam Succinate dehydrogenase flavoprotein subunit (SdhA) 504 620 - -
Acco11g2274 665 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 617 665 - -
Acco11g2274 665 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 310 428 IPR027477 -
Acco11g2274 665 FunFam Succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 71 293 - -
Acco11g2274 665 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 116 125 IPR003952 GO:0016491
Acco11g2274 665 Gene3D - 505 615 - -
Acco11g2274 665 PIRSF SDHA_APRA_LASPO 71 655 - -
Acco11g2274 665 SUPERFAMILY FAD/NAD(P)-binding domain 74 499 IPR036188 -
Acco11g2274 665 Gene3D - 82 489 IPR036188 -
Acco11g2274 665 Gene3D succinate dehydrogenase protein domain 616 665 - -
Acco11g2274 665 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 63 665 IPR030664 -
Acco11g2274 665 FunFam Mitochondrial succinate dehydrogenase flavoprotein subunit 320 423 - -
Acco11g2274 665 Pfam Fumarate reductase flavoprotein C-term 534 665 IPR015939 GO:0016491
Acco11g2274 665 NCBIfam succinate dehydrogenase flavoprotein subunit 79 665 IPR011281 GO:0006099|GO:0016627|GO:0050660
Acco11g2274 665 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 524 665 IPR037099 GO:0016491
Acco11g2274 665 Pfam FAD binding domain 82 478 IPR003953 -
Acco11g2274 665 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 424 489 - -
Acco11g2274 665 NCBIfam succinate dehydrogenase or fumarate reductase, flavoprotein subunit 82 665 IPR014006 GO:0016627|GO:0022900|GO:0050660
Acco11g2274 665 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 320 423 IPR027477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g2274 Acco-ChrAcco11 36329590 36338300 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2274 11 36329590 36338300 Acco11g2274 11 36329590 36338300 ECH