Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g2258 ATGCAAGGCACATTTCTCTTACGACTTCCTAAGATAGCGTTTAGAGGGTCGGGGAGAAAGAACAAAGGAGGAAAAATGAAGTGCCCGTACTGTGCGGCGGCTCAAGGGCGTAGCGCCACCACCAGCTCTGCCCGCTCCATAACGGAGTGCACATCCTGCGGCCGAGTTGTTGAAGAGCGACAGACCCACCCTCATCATCTCTTCCACCTCCGCGCACAAGACAATCCTCTCTGTCTCGTCACTCCCGACATACCCGCCCTCCAACCCTCTCATCAAAGCCAAGTCGACGATGACCCCTTCGAGCCCACCGGCTTCATCACTGCATTTTCCACTTGGTCCCTTGAGCCCAGCCCTCTCTACCTCCAGTCCTGTCTTTCCTTCTCTGGCCACCTCGCCGAGCTAGAGAGGGCCCTGGAATCGTCCTCATCTTCATCCTCCTCTTCGACACCATCATCTTCAACTTCGTCGACGGTTGTGGTTGATAATTTGAGGGCGTACATGCAGATTATTGATGTCGCTTCGATACTTGGGTTGGACTACGATATCTCAGACCATGCGTTTCAATTATTCAGGGATTGTTGCTCGGCTACTTGTTTGAGAAACCGGAGCGTCGAAGCGCTTGCCACTGCTGCTCTTGTTCAGGCAATTAGAGAGGCTCAGGAACCCAGAACCCTTCAGGAAATTTCAATTGCAGCCAATGTGCCGCAAAAGGAAATTGGGAAATACATAAAGATACTTGGAGAGGCTTTGCAGCTCAGTCAGCCTATTAATAGCAATTCTATTTCAGTTCATATGCCTAGATTTTGTACCCTTCTACAACTCAATAAATCTGCTCAGGAACTGGCCACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCTATTAGCATTTCAGCAGCTGCTATATACCTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATCTGCAAGGTGACTGGTCTTACTGAAGTCACTCTTCGGAAAGTGTACAAGGAACTTCTAGAGAATTGGGATGATTTGCTTCCCTCTAATTATACACCAGCTGTTCCTCCTGAGAGGGCATTCCCTACTACTGTAATTGCTTCAGGTCGTTCATCAGCAACTAAGGTTGATGCAATAGAGGTTAATTCTTCTTTAGACAGAGACAAGCTAATAGAAGTTAAACCTAGCAAACCAAATGAGGTTCCAGTCATGGTACATCAGCTGAGGGGGAAAGATGATGTTGAAAGCAAGAGCAATGCTTGTGCGACCCACTCGACAATGAATCAGCCGTCAGCTTTCTGGCAATCCCAACTGCCTATTGGGGCGGGTAATCATAGAACGACAGGAGAAAAAAGTTGGAATGTTTTACAAGGAATGGATGTAGAGGGACTACAGCATAACCACCTACAGCCTGAACAGAAGTCTGAAGACACAAATGATATTAATATCAATAATCCTTTTCAAAAACCCAACCATCTTAGCAGTCCTTCTGCGTCGTCTGCTAGCCCTGCTATGAAGCCCTTTCCGGCTCCGCCTTCATCTACGCCTCCAAATGTCTGA 1569 0.4793 MQGTFLLRLPKIAFRGSGRKNKGGKMKCPYCAAAQGRSATTSSARSITECTSCGRVVEERQTHPHHLFHLRAQDNPLCLVTPDIPALQPSHQSQVDDDPFEPTGFITAFSTWSLEPSPLYLQSCLSFSGHLAELERALESSSSSSSSSTPSSSTSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSATKVDAIEVNSSLDRDKLIEVKPSKPNEVPVMVHQLRGKDDVESKSNACATHSTMNQPSAFWQSQLPIGAGNHRTTGEKSWNVLQGMDVEGLQHNHLQPEQKSEDTNDININNPFQKPNHLSSPSASSASPAMKPFPAPPSSTPPNV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g2258 522 MobiDBLite consensus disorder prediction 508 522 - -
Acco11g2258 522 MobiDBLite consensus disorder prediction 479 505 - -
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 330 344 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 43 63 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 209 228 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 298 314 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 264 282 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 PRINTS Transcription initiation factor IIB signature 235 250 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 FunFam Transcription initiation factor IIB 263 360 - -
Acco11g2258 522 Gene3D - 26 248 - -
Acco11g2258 522 FunFam Transcription initiation factor TFIIB 163 254 - -
Acco11g2258 522 SUPERFAMILY Cyclin-like 261 359 IPR036915 -
Acco11g2258 522 SUPERFAMILY Cyclin-like 164 254 IPR036915 -
Acco11g2258 522 SMART cyclin_7 263 344 IPR013763 -
Acco11g2258 522 SMART cyclin_7 167 248 IPR013763 -
Acco11g2258 522 MobiDBLite consensus disorder prediction 472 522 - -
Acco11g2258 522 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 26 460 IPR000812 GO:0006352|GO:0070897
Acco11g2258 522 CDD CYCLIN_TFIIB_archaea_like_rpt2 260 346 - -
Acco11g2258 522 Gene3D - 263 359 - -
Acco11g2258 522 Pfam Transcription factor TFIIB repeat 165 246 IPR013150 GO:0017025
Acco11g2258 522 Pfam Transcription factor TFIIB repeat 263 344 IPR013150 GO:0017025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2258 11 36226327 36233704 Acco11g2258 11 36226327 36233704 ECH