Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1884 ATGGGCTGTTTCTCCTCTAAGGTAGCAAGTAAGACAAAGTATCCTATGAGAGAGGACCCTTCAGTTCTTGCATCAGAAACAGCATTCAGTGTGAGCGAGGTTGAAGCACTGTTTGAGCTTTTCAAGAGCATCAGCAGTTCAGTCGTCGATGATGGATTAATCAGTAAGGAAGAGTTTAACTTGGCAATTTTTGACAATAAAAAGAAGGATAATCTCTTTGCCGGTCGGATATTTGACATGTTTGATGTTAAGAAGAAGGGAGCCATTGATTTTGGTGATTTTGTTAGATCACTCAGTGTCTTCCACCCAAGAGCATCACTGCAAGACAAGATAGATTTCTCATTTAGGCTTTACGATTTGCACAATACTGGTTTTATTGAGCGCCAAGTGGTCAAACAAATGTTAATTGCTTTTCTTTCAGAATCTGAAACGAAGTTGGCCGACGATGCATTAGAAAAAATTCTTGATAAGACTTTCTTGGATGCTGATACAAATCGAGATGGGAAAATAGACAAGTTCGAATGGGAAAACTTGGTTTCCAAGAACCCATCGCTACTAAAAGTCATGACCCTACCCTACTTGAGGGACATAACAACCACATTCCCAAGCTTTATTTTTAATTCCAAGGTCGACGAAATCACAAAGTGA 648 0.3951 MGCFSSKVASKTKYPMREDPSVLASETAFSVSEVEALFELFKSISSSVVDDGLISKEEFNLAIFDNKKKDNLFAGRIFDMFDVKKKGAIDFGDFVRSLSVFHPRASLQDKIDFSFRLYDLHNTGFIERQVVKQMLIAFLSESETKLADDALEKILDKTFLDADTNRDGKIDKFEWENLVSKNPSLLKVMTLPYLRDITTTFPSFIFNSKVDEITK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1884 215 Gene3D - 19 213 - -
Acco11g1884 215 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Acco11g1884 215 FunFam calcineurin B-like protein 3 19 212 - -
Acco11g1884 215 Pfam EF-hand domain pair 109 174 IPR002048 GO:0005509
Acco11g1884 215 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Acco11g1884 215 PANTHER CALCINEURIN B 2 212 IPR045198 GO:0005509|GO:0019722|GO:0019900
Acco11g1884 215 ProSiteProfiles EF-hand calcium-binding domain profile. 106 141 IPR002048 GO:0005509
Acco11g1884 215 SUPERFAMILY EF-hand 21 204 IPR011992 -
Acco11g1884 215 SMART efh_1 73 101 IPR002048 GO:0005509
Acco11g1884 215 SMART efh_1 110 138 IPR002048 GO:0005509
Acco11g1884 215 SMART efh_1 154 182 IPR002048 GO:0005509
Acco11g1884 215 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1884 Acco-ChrAcco11 33110482 33112858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1884 1 214 EF-hand Containing Proteins AT4G17615 75.234 2.21e-115 326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1884 11 33110482 33112858 Acco12g1711 12 28243929 28246756 CCT
Acco11g1884 11 33110482 33112858 Acco11g1884 11 33110482 33112858 ECH