Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1662 ATGGCATTCATCAAAAGCTTCCCTCTCTTCTCCTTCCTTCTTCTGGCTCTTGCCTTCTCTCTCTCCCACGCCGCCAGGTTCGATGTCACCAACAAATGCACCAACACCCTCTGGGCGGCCGCCGTGCCTGGTGGTGGCAAACAGCTGAACTCCGGCGAGACATGGAGCTTTGACGTGGCTGCTGGCACCAACAAGGCCCGCATATGGGCCCGAACCAACTGCAACTTCGACGGGTCGGGTCGTGGACACTGTGAAACTGGTGATTGTGGAGGTTTACTCGAATGCAAAGCCTATGGATCGCCCCCAGACACACTTGCCGAATTTGCCCTTAACCAGTATAATAACATGGACTTCTATGATATTTCATTGGTGGACGGTTTCAATGTTCCTATGGAGTTCAGTCCGACGTCTAATGGATGCACACGTACCATCGCATGCACCGCCGACATCATCGGACAGTGCCCTGCCCAGCTGAAAACTCAGGGTGGATGTAATAATCCCTGCACTGTGTTTAAGACAGATGAGTACTGTTGCAACTCTGGAAACTGTGGGCCCACTGATTATTCTAAATTCTTTAAGGATAGGTGCCCTGATGCTTATAGTTACCCAAAGGATGATGCTACCAGCACTTTCACTTGCCCAGGTGGAACCAACTACAGGGTTGTTTTTTGCCCTTGA 678 0.5103 MAFIKSFPLFSFLLLALAFSLSHAARFDVTNKCTNTLWAAAVPGGGKQLNSGETWSFDVAAGTNKARIWARTNCNFDGSGRGHCETGDCGGLLECKAYGSPPDTLAEFALNQYNNMDFYDISLVDGFNVPMEFSPTSNGCTRTIACTADIIGQCPAQLKTQGGCNNPCTVFKTDEYCCNSGNCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1662 225 SMART tha2 27 225 IPR001938 -
Acco11g1662 225 PIRSF PR5 1 225 IPR001938 -
Acco11g1662 225 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Acco11g1662 225 Pfam Thaumatin family 31 225 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 215 224 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Acco11g1662 225 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Acco11g1662 225 PANTHER OS03G0233200 PROTEIN 12 225 IPR001938 -
Acco11g1662 225 FunFam Thaumatin I 25 225 - -
Acco11g1662 225 SUPERFAMILY Osmotin, thaumatin-like protein 25 225 IPR037176 -
Acco11g1662 225 ProSiteProfiles Thaumatin family profile. 24 225 IPR001938 -
Acco11g1662 225 Gene3D Thaumatin 25 225 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1662 Acco-ChrAcco11 31022048 31022725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1662 3 225 Receptor kinase-like Gene Family AT5G38280 35.458 9.52e-41 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1662 11 31022048 31022725 Acco11g1662 11 31022048 31022725 ECH