Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1625 ATGAACTGTGATTTTGAAAATCCAAAATGGTGCGACAAGTCTGCTCCTGGACTGCACTTGAAGGGCGTGATCGTGTTCTTTTTTGGCCAACGAAAAAAGATGTGGATGTTAGGATGGAACGGGCCATCTGGATTCTCAGCCAGTTCTACTGCGGAGCAAGTTACTGAAGGAATCGATGCGAACGGTCTCACTGCCATCATCACAGGGGCATCAAGTGGTCTTGGTCTTCACACCACCCGAGTTCTAGCATTGCGTGGTGTCCATGTGGTTATGGCAGTAAGGAATGAGGACTCTGGTATGAGCGTCAAAAACAAATTAGTTGAGGAAATCCCCTCTGCTAAAATTGACGTTATGAAGCTAGACCTTGGCTCAATGGCATCAGTAAGGAAATTTGCTGCAGATTACAATTCCTCTGGTCTGCCTCTCAATATCCTAATTAATAATGCAGGAATTATGGCTGCCCCGTTCACACTTTCCCAAGACAACATAGAGTTGCAGTTTGCAACCAATCATTTAGGTCATTTTCTCTTAACAAACCTTTTATTGGACACTATGAAGAAAACTGTGCATGAATGCAAGCGGGAGGGAAAAATAGTTATTTTATCATCAGAGGCACACAGATTTGCATATAAAGAAGGGATTCGTTTTGATAAAATTAATGATGAATCAGGATACAACAGTTATTTTGCTTATGGACAGTCAAAGCTTGCTAATATCTTGCATGCAAAAGAGCTTTCAAGACGTTTGAAGGAAGAAGGAGTGGAAATAACGGCCAACTCCCTTCATCCTGGGTCGATTCTAACAAATATTCTTCGGTATCATGGTTTCATTAATGCCGTGGCTAGCTCGGTGGCAAAGTTCTTCCTGAAAAATGTGCAGCAGGGAGCTGCAACTCAATGTTATGTGGCATTACATCCACAAGTGAAGGGAATATCTGGTGAATATTTTATGGATAGCAACAAGGCAAAACCGAACTCTCTCGCTACTGATTCTGAATTGGCCAGAAAGCTCTGGGAATTCAGTTCGAGCCTGACAGACCCAAAGTAG 1047 0.4269 MNCDFENPKWCDKSAPGLHLKGVIVFFFGQRKKMWMLGWNGPSGFSASSTAEQVTEGIDANGLTAIITGASSGLGLHTTRVLALRGVHVVMAVRNEDSGMSVKNKLVEEIPSAKIDVMKLDLGSMASVRKFAADYNSSGLPLNILINNAGIMAAPFTLSQDNIELQFATNHLGHFLLTNLLLDTMKKTVHECKREGKIVILSSEAHRFAYKEGIRFDKINDESGYNSYFAYGQSKLANILHAKELSRRLKEEGVEITANSLHPGSILTNILRYHGFINAVASSVAKFFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKAKPNSLATDSELARKLWEFSSSLTDPK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1625 348 CDD retinol-DH_like_SDR_c_like 62 338 - -
Acco11g1625 348 PRINTS Glucose/ribitol dehydrogenase family signature 64 81 IPR002347 -
Acco11g1625 348 PRINTS Glucose/ribitol dehydrogenase family signature 140 151 IPR002347 -
Acco11g1625 348 PRINTS Glucose/ribitol dehydrogenase family signature 190 206 IPR002347 -
Acco11g1625 348 PRINTS Glucose/ribitol dehydrogenase family signature 231 250 IPR002347 -
Acco11g1625 348 PRINTS Glucose/ribitol dehydrogenase family signature 254 271 IPR002347 -
Acco11g1625 348 Gene3D - 53 347 - -
Acco11g1625 348 PANTHER RETINOL DEHYDROGENASE 42 345 - -
Acco11g1625 348 Pfam short chain dehydrogenase 64 211 IPR002347 -
Acco11g1625 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 62 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1625 Acco-ChrAcco11 30744033 30748900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1625 64 324 Acyl Lipid Metabolism Gene Families AT3G55290 27.437 2.75e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1625 11 30744033 30748900 Acco11g1625 11 30744033 30748900 ECH