Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1621 ATGCTGCCTGCTTCAGCTTCTAATTCCTCTGAATGTCCTCTTCCCAAATATGACTCCAACATAGTCACCATTAATGTAGGAGGCCAGTTCTTTCAAACCACAAAGCAGACTCTCTACTCTGCTGGCCCCAAGTCCTTCTTTGCTAAAATCGCCGAATGTCAACCCTCTGATCCATTCATCGATAGGGATCCTGAGTTGTTTGCTGTCCTCCTTTCCCTTCTCCGAACAGGTAATCTTCCTTCCAAAGCCAAGGCATACGATCTTCAAGATCTGATTTCTGAGTCCCAATTTTACGGTATCGAGCACACACTCAGAAATTCCCTATCTGGCCCTTCTCAATTCGAGCCCTTCAACCTCCAGAAATCGATTATTTTACCTCTTAATGGACGAGATACGCCCTCCGCCATCGCCACCTCAGGGTTCGGCTCGGTTCATGTGGCGCATGGCAGTAAGATAACCTCCTTTGATTGGTCCCTTCGACGCAAGTCCACTTACTTGACTCAATTCATTGCTGTCGATTCTCTATTAGCCCTCTCCGATTCAATGGTGGCTGCGGGTGCCCATGACTTTTCGGGGTTGGAAATTATTGATTTGAAAAGGAAAGTGATCGAAACAACCTTAAATTGGGAGAACATGACCAGATCTGGTTCAACAGTCCTCGCAATTGGATCTTCGCCGGAGCACCTATTTGCGAGCTTCGAATCAGACCGCCGCAATTCTAATTCAATAATGGTATATGATTTAAATACTTTCAGACCAGTTACGGAAATTGCTCACAATGAGATTTTTGGTGCTGATATCGATTCTGCCATCCCAGCAACGAAACTGAAATGGTCGTCGGGTTACAACTTGCTCATGGCATCTGGGTCTCATAGCGGTCCCTCCGGTGTATCTGGCAGCATAAGATTATGGGATGTGAGGTCTGGCAATGTTGTTTGGGAGATGAAGGAGCAGATAGATTGTTTTGTCGACGTGACAGTTTCAGATAACTTGTCAGTAATCTTCAAGGTTGGGGTACATTCTGGGGAGGCATTTTTCGTGGATATGCGTAATTTGAGTTATGGGAATTCCTGGGTTTGTCTTGGAGACAACAAGAAAGTGTTAAATGGGAGGAAGGAAGGTATAGGATGCAAGGTTGAAGATCAGGGCAATCAAGTGTTCTGCACTAAGGGAGGAGACATAGAAATGTGGTCAGAGGTTATAATGGGCTCTGCAAAGAAAGGGGATGAGAAGGTGGATAATAGGGTATTCAAGAAAAACTTGATGGGCGTAGTGAAAGACATTGGAGGTTCAAAGATCACCAATTTGGCCTTTGGAGGGAATAAAATGTTCTTGACAAGGAAGGATCAGCAATTTGTTGAGGTTTGGCAGAGTTCTACTGTGGAACTTTAA 1392 0.449 MLPASASNSSECPLPKYDSNIVTINVGGQFFQTTKQTLYSAGPKSFFAKIAECQPSDPFIDRDPELFAVLLSLLRTGNLPSKAKAYDLQDLISESQFYGIEHTLRNSLSGPSQFEPFNLQKSIILPLNGRDTPSAIATSGFGSVHVAHGSKITSFDWSLRRKSTYLTQFIAVDSLLALSDSMVAAGAHDFSGLEIIDLKRKVIETTLNWENMTRSGSTVLAIGSSPEHLFASFESDRRNSNSIMVYDLNTFRPVTEIAHNEIFGADIDSAIPATKLKWSSGYNLLMASGSHSGPSGVSGSIRLWDVRSGNVVWEMKEQIDCFVDVTVSDNLSVIFKVGVHSGEAFFVDMRNLSYGNSWVCLGDNKKVLNGRKEGIGCKVEDQGNQVFCTKGGDIEMWSEVIMGSAKKGDEKVDNRVFKKNLMGVVKDIGGSKITNLAFGGNKMFLTRKDQQFVEVWQSSTVEL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1621 463 PANTHER BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER 17 460 IPR045068 -
Acco11g1621 463 SMART BTB_4 20 115 IPR000210 GO:0005515
Acco11g1621 463 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 184 459 IPR011044 -
Acco11g1621 463 SUPERFAMILY POZ domain 19 105 IPR011333 -
Acco11g1621 463 Gene3D - 111 343 IPR015943 GO:0005515
Acco11g1621 463 Pfam BTB/POZ domain 22 103 IPR003131 GO:0051260
Acco11g1621 463 CDD BTB_POZ_KCTD-like 22 98 - -
Acco11g1621 463 Gene3D Potassium Channel Kv1.1; Chain A 15 110 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1621 Acco-ChrAcco11 30712936 30714327 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1621 11 30712936 30714327 Acco11g1621 11 30712936 30714327 ECH