Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1618 ATGGCGCGGTTGGTTCTGCCATCGAAGACTCTTGCTTTTTCGAGGAAGAGTTTACTGGGCTTGATCTCCACTGCTCCTGTGATTACCCATATCTATCTTCAGTTAACTAGCCGTGTTAACTATTTCGAGAATACAGCTAAGAATAGCATCGTATTGAGGCGTTTCCTTGCCTCACAGGCCATTTCCCGACAGAGGTGTTGCCCATTTCACCCTTCATTTTCTTCAAGTGCCAAGCAAGTGAACCGGAGGTTAGTTTGTTCAGTTGCCACAGAGGACTTGCCAAAGCAAGTTGAAGAATCTAATATGGAGACACCAAGAGAAATATTCTTGAAGGATTATAAGATGCCTGATTACTACTTTGACACAGTGGATCTGAGATTTTCCTTGGGTGAGGAGGGCTCAATAGTTAGCTCAAAAATTACTGTCTTTCCTCGCATTGAAGGCTCTTCTCCCCCACTTGTTTTGGATGGACAGGACTTAAAATTGATTTCAATTCTGTTGAATGGTAAAGCATTGAAGGAGGATGACTACAATTTGGGTCCTCGACGTCTAACCATTCATTCACCTCCTAGTGGTAAATTTGTTATGGAAATTGTAAATGAGATCCACCCACAGAAGAACACGTCATTGGAGGGGCTCTACAAGTCATCTGGAAATTTCTGTACTCAATGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACATGTCACATTGAGGCGGATAAATCGTTGTACCCAGTGTTGTTGTCTAATGGAAATCTGATTGAGCAAGGCGACTTGGAGAATGGAAAGCATTATGCTATTTGGGAGGACCCCTACAAGAAGCCTTCCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACAGAGTAGAGATGACACATTTATCACGTGCTCAGGACGCAAGGTGGCTCTAAGGATCTGGACTCCTGCTGAGGATGTACCAAAGACCGCACATGCAATGTATTCTCTAAAGGCAGCTATGAAGTGGGATGAAGATGTTTTCGGTCTTGAGTATGACCTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAACTCCAAGCTTGTTTTAGCATCTCCAGAAACTGCTACGGATGCGGATTATTCTGCAATATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACTTGTCGTGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACTGTTATACGAATTGCTGATGTTTCAAAACTTCGAAATTATCAATTTCCACAGGATGCTGGGCCCATGGCTCACCCAGTGCGACCACACTCTTACATCAAGATGGACAACTTCTACACAGGAGTGAGCCCTGTCTATGAGAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGTTGGGAAGTCAGGGATTTCGAAAAGGCATGGACTTATATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTTTGCTGCAATGCGAGATGCAAATGATGTGGATTTTGCTAATTTCCTACTCTGGTACTCACAAGCTGGAACCCCTATTATCAAAGTGAATTCCTCTTATAATCCCGAAGCGCATACTTTTTCTTTAAAAATTAGTCAGGAGATTCCGCCAACTCCTGGACAACCAGTTAAGGAATCCATGTTCATTCCTTTGGCAGTAGGTTTGCTTGACTCAAAAGGCAAGGACATTCCTCTTTCAACTATATATCACGATGGAACTTTGCAGTCTGTTTCAAGAGATGGTCAGCCTGTATACACCACAGTTCTTCGGTTCACCAAGAAAGAAGAGGAATTTGTGTTCTCCGATGTATTTGAGAGGCCTGTCCCATCTCTATTACGGGGATACAGTGCTCCAGTCCGTCTTGAATCAGATCTCACTGACAGCGACCTGTTTTTCCTACTGGCTAATGATTCAGATGAATTTAACCGTTGGGAGGCTGGACAAATTCTGGCTCGCAAGCTCATGCTTAGTTTGGTGGATGATTTCCAACATAACAAACCATTAGTTCTGAACAAAAAGTTTGTGGATGGTTTCAAGAGCATTCTATCTGACTCAAGCCTGGACAAAGAATTTGTTACGAAGGCTATAACTTTGCCTGGTGAGGGAGAAGTAATGGACATGATGGAGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGAATTTTTATCCGGAAACAGCTTGCAAGTGAATTGAGGGCAGAATTCCTCAGCACACTAAAAGATAACAGGAGCTCCGAAGAGTACATGTTCAATCATCCTAACATGGCCAGACGTGCTTTGAAGAATATTGCTCTTGCATATCTTGCCTGCCTGGAGGATCCTGAGATCACCAACATTGTGCTGCATGAGTATAATACGGCGACAAATATGACTGAACAATTTGCAGCTTTGGCAGCCATATCCCAGAACCCTGGTAAAACCCGTGATGATGTTCTTGCTGATTTCTATGGCAAGTGGCAGCATGACTTCTTGGTGGTGAATAAATGGTTTGCGCTTCAAGCAGTGTCTGATATTCCAGGAAATGTTGAGAATGTGAAGCAACTTTTGAATCACCCAGCTTTTGACATGCGCAATCCAAACAAAGTGTACTCACTCATTGGAGGTTTCTGCGGTTCCCCGGTGAACTTCCACGCAAAGGATGGATCAGGCTACAAGTTTATGGGAGACATTGTGCTGCAACTGGACAAAATCAATCCTCAAGTTGCATCACGAATGGTGTCTGCCTTCTCTAGATGGAAGCGTTATGATGAAAACAGACAAAAGCTTGCCAAGGCCCAGCTGGAGCTAATTATGTCAGCCAATGGACTGTCAGAGAATGTGTATGAGATTGCTTCCAAAAGCTTAGCTGTTTAG 2973 0.4329 MARLVLPSKTLAFSRKSLLGLISTAPVITHIYLQLTSRVNYFENTAKNSIVLRRFLASQAISRQRCCPFHPSFSSSAKQVNRRLVCSVATEDLPKQVEESNMETPREIFLKDYKMPDYYFDTVDLRFSLGEEGSIVSSKITVFPRIEGSSPPLVLDGQDLKLISILLNGKALKEDDYNLGPRRLTIHSPPSGKFVMEIVNEIHPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCHIEADKSLYPVLLSNGNLIEQGDLENGKHYAIWEDPYKKPSYLFALVAGQLQSRDDTFITCSGRKVALRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYSAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVIRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGVSPVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDVDFANFLLWYSQAGTPIIKVNSSYNPEAHTFSLKISQEIPPTPGQPVKESMFIPLAVGLLDSKGKDIPLSTIYHDGTLQSVSRDGQPVYTTVLRFTKKEEEFVFSDVFERPVPSLLRGYSAPVRLESDLTDSDLFFLLANDSDEFNRWEAGQILARKLMLSLVDDFQHNKPLVLNKKFVDGFKSILSDSSLDKEFVTKAITLPGEGEVMDMMEVADPDAVHAVRIFIRKQLASELRAEFLSTLKDNRSSEEYMFNHPNMARRALKNIALAYLACLEDPEITNIVLHEYNTATNMTEQFAALAAISQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAVSDIPGNVENVKQLLNHPAFDMRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFMGDIVLQLDKINPQVASRMVSAFSRWKRYDENRQKLAKAQLELIMSANGLSENVYEIASKSLAV 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1618 990 Pfam Domain of unknown function (DUF3458) Ig-like fold 550 663 IPR035414 -
Acco11g1618 990 FunFam Aminopeptidase N 550 664 - -
Acco11g1618 990 Gene3D tricorn interacting facor f3 domain 115 298 IPR042097 -
Acco11g1618 990 PRINTS Membrane alanyl dipeptidase (M1) family signature 417 429 IPR001930 GO:0006508
Acco11g1618 990 PRINTS Membrane alanyl dipeptidase (M1) family signature 362 372 IPR001930 GO:0006508
Acco11g1618 990 PRINTS Membrane alanyl dipeptidase (M1) family signature 280 295 IPR001930 GO:0006508
Acco11g1618 990 PRINTS Membrane alanyl dipeptidase (M1) family signature 398 413 IPR001930 GO:0006508
Acco11g1618 990 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 308 556 - -
Acco11g1618 990 Gene3D - 550 663 IPR038438 -
Acco11g1618 990 Gene3D - 665 989 IPR037144 -
Acco11g1618 990 Gene3D - 299 383 - -
Acco11g1618 990 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 100 989 IPR012779 GO:0008270
Acco11g1618 990 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 105 296 IPR042097 -
Acco11g1618 990 FunFam Aminopeptidase N 384 549 - -
Acco11g1618 990 NCBIfam aminopeptidase N 112 988 IPR012779 GO:0008270
Acco11g1618 990 Pfam Peptidase family M1 domain 332 542 IPR014782 GO:0008237|GO:0008270
Acco11g1618 990 FunFam Aminopeptidase N 115 298 - -
Acco11g1618 990 CDD M1_APN 112 547 - -
Acco11g1618 990 FunFam Puromycin-sensitive aminopeptidase 665 989 - -
Acco11g1618 990 FunFam Putative aminopeptidase N 300 383 - -
Acco11g1618 990 Pfam Domain of unknown function (DUF3458_C) ARM repeats 667 989 IPR024601 -
Acco11g1618 990 Gene3D Neutral Protease Domain 2 384 549 IPR027268 -
Acco11g1618 990 Pfam Peptidase M1 N-terminal domain 191 290 IPR045357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1618 Acco-ChrAcco11 30686031 30693849 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1618 11 30686031 30693849 Acco11g1618 11 30686031 30693849 ECH