Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1610 ATGTGCACGGTACCTAATGTCCACCCAATTTCAAATGCTATTCATACTTACCGCAAAAATAATATCCTCGATAGGTCCCCTCTCCTAGCGCGCCTCTTACCCTTTCTTCCAGCCGATTTCGCGCGTTTCGCTATCATCTGTGTCTCGATTTCTCGCCGTTTTTCTTGTCTTTTTAAGCTGTGGCGCAACGCAAGAGCTTGCTGGAATAATTGTGCAATCTCTGCTCAGCTCAAAGTTCCTATCATGGGACACGGACACGGGGACAAAGGCCGACCTTTCAAAAAGTTCAAGGCCGCCGCTAAATTAGACGATTCCCGAAAAGGATTCGTCGACGATGACAATGCGTTTATGGGTGATGATGGTTATGATGATGGCGGTGAGAAAGAAGCCAAGGCCAAAGATTTTAGCAAATTAGAGCTGAAAAAGGATCATGCCAATCGACCACTTTGGGCTTGTGGCAATGGTCGGATATTCCTCGAGACCTTCTCTCCCTTGTACAAACAAGCTTACGATTTCCTTATTGCCATTGCGGAACCCGTTTGCAGGCCAGAGTCAATGCACGAATACAACCTCACTCCACATTCCCTCTATGCTGCGGTTTCAGTTGGTCTGGAAACAGAAACGATCATATCAGTTTTGAACAAGTTGTCCAAGACAATGCTTCCTAAAGAGATGATTAAGTTTATTCAGGACTCGACTGCAAATTATGGCAAAGTAAAGCTTGTACTTAAGAAAAATCGATACTTTATTGAATCTCCATTTCCTGAGGTGTTGAAGACACTGCTCAGAGATGAAGTTATATCTCGATCAAGGATCACTTCTGAGGGTGCAGCTGGAGATGGATTTACTATTAGCAAAACAGCAGGTGAAATTGAAGGCACTCACGGTGAGTTGCTGAATGAAGCAGAAGTAGCTGCAGCTGCAGAAGAGAAAGAAACTCATTCTTTTGAAATTGATCCTTCTCAGGTTGAAAATGTGAAGCAACGATGTCTGCCAAATGCATTGAATTATCCCATGTTGGAGGAGTATGACTTTAGAAATGATACGGTGAACGCTGATCTGGATATGGAACTAAAGCCTCAAGCACAGCCACGGCCATATCAAGAGAAGAGCCTGAGTAAAATGTTTGGAAATGGTAGAGCAAGATCCGGCATCATAGTTCTACCTTGTGGTGCTGGTAAGTCTCTTGTTGGTGTTTCTGCAGCCTGCCGTATAAAAAAGAGCTGCCTTTGTTTGGCAACAAATGCTGTGTCTGTGGATCAGTGGGCTTTTCAGTTTAAGCTATGGTCAACCATCCGAGATGAAAATATCTGCCGTTTCACATCGGATAGCAAAGAGAGGTTTCGTGGTAATGCTGGAGTGGTTGTGACAACATATAATATGGTTGCTTTTGGTGGCAAACGGTCTGAAGAATCTGAGAAGATCATTGAGGAAATTAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTGGTTCCTGCACATATGTTTCGGAAGGTCATTAGCCTCACTAAATCTCACTGCAAACTTGGGCTCACTGCCACACTTGTGAGAGAGGATGAAAGGATTACAGATCTGAATTTTCTCATTGGTCCCAAATTGTATGAAGCCAATTGGTTGGATCTAGTCAAAGGCGGGTTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAATTTTTTGCGGAGTATCTGAAGAAGGAGAATTCCAAGAAGAGGCAGGCGCTCTATGTGATGAATCCAAACAAGTTCAGAGCATGCGAGTTTCTCATCAAGTACCACGAAACACAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCTCTAACTGAGTATGCCATGAAACTGCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGGACAAAAATTCTACAAGCATTCAAAACTAGCAAAGATGTCAACACTATATTCCTTTCCAAGGTGGGTGATAACTCAATTGACATTCCAGAAGCAAATGTGATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGTCTAGGCCGTATTCTTAGGGCTAAGGGCAAGCTTCAGGATAGGATGGCTGGGGGTAAGGAGGAGTATAATGCATTCTTTTATTCTCTCGTGTCAACAGATACCCAGGAGATGTACTACTCAACCAAGAGGCAGCAATTTTTAATTGATCAGGGTTATAGCTTTAAGGTTATTACAAGCTTCCCTCCACCTGGAGAAGAAGTTTCATTGAATTATTATCATCTTGAAGATCAACTGGCGCTTCTTGGAAAGGTCTTGAGTGCTGGTGACGATGCTGTTGGTCTTGAGCAACTTGATGAAGATGCAGATGATGTAGCTCTTCACAATGCCCGGCGTTCGGCAGGATCCATGAGCGCCATGTCGGGTGCAAAGGGAATGGTTTACATGGAGTACAGTACTGGGCGCAACAAAGGTCAAGCGCAGATGAAGAGCAAGCCAAAAGATCCATCCAAGCGACACGCTTTATTTAAAAGACGCTATGGCTCATAG 2556 0.4358 MCTVPNVHPISNAIHTYRKNNILDRSPLLARLLPFLPADFARFAIICVSISRRFSCLFKLWRNARACWNNCAISAQLKVPIMGHGHGDKGRPFKKFKAAAKLDDSRKGFVDDDNAFMGDDGYDDGGEKEAKAKDFSKLELKKDHANRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTMLPKEMIKFIQDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDEVISRSRITSEGAAGDGFTISKTAGEIEGTHGELLNEAEVAAAAEEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNADLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIKYHETQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSFPPPGEEVSLNYYHLEDQLALLGKVLSAGDDAVGLEQLDEDADDVALHNARRSAGSMSAMSGAKGMVYMEYSTGRNKGQAQMKSKPKDPSKRHALFKRRYGS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1610 851 FunFam Probable DNA repair helicase RAD25 354 545 - -
Acco11g1610 851 CDD SF2_C_XPB 556 720 - -
Acco11g1610 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 539 IPR027417 -
Acco11g1610 851 SMART helicmild6 620 698 IPR001650 -
Acco11g1610 851 Pfam ERCC3/RAD25/XPB C-terminal helicase 545 793 IPR032438 -
Acco11g1610 851 Pfam Type III restriction enzyme, res subunit 363 519 IPR006935 GO:0003677|GO:0005524|GO:0016787
Acco11g1610 851 Gene3D - 546 786 IPR027417 -
Acco11g1610 851 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 592 758 IPR001650 -
Acco11g1610 851 Gene3D - 353 545 IPR027417 -
Acco11g1610 851 FunFam Putative DNA repair helicase rad25 546 788 - -
Acco11g1610 851 SMART ultradead3 360 541 IPR014001 -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 483 503 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 587 602 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 607 629 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 345 371 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 654 672 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 233 252 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 710 733 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 801 820 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 147 167 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 376 398 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 549 571 - -
Acco11g1610 851 PRINTS Xeroderma pigmentosum group B protein signature 673 698 - -
Acco11g1610 851 NCBIfam DNA repair helicase rad25 134 847 IPR001161 GO:0003678|GO:0006289|GO:0006367
Acco11g1610 851 CDD DEXHc_XPB 356 525 - -
Acco11g1610 851 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 375 537 IPR014001 -
Acco11g1610 851 MobiDBLite consensus disorder prediction 824 851 - -
Acco11g1610 851 PANTHER RAD25/XP-B DNA REPAIR HELICASE 138 820 - -
Acco11g1610 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 795 IPR027417 -
Acco11g1610 851 Pfam Helicase conserved C-terminal domain 149 272 IPR032830 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1610 11 30565422 30573068 Acco11g1610 11 30565422 30573068 ECH