Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1593 ATGCACTCTTGTTTCTGGAATCTGGATATATATATTGTTTCTCCTTGGTATGATCAACACCTGTTTTCCACAATCAGCTTTATTAACTTTAGGCTTGGGAGGAATGTATACCGGTGTGTACATCAAGTCTTAGTGTTTCACTGGTTCGCTCTTCTGCTCCTTTACAATTCGATTCTATTCACCCTTCTCATTTTCCGTGATTTCTGTTTTCTGGTTGTACGAGCTACAGTTCGTAGATTCGCAATGGCAGCCATCTCCAATTCACTGTCCTTGAAGCACGGCCTCTCACTTTGGTGTCCTCAAACTGGGTCTCTCAGTCGACTTAATTCTTCTTCTTCAATCAAGTTCAGAACCTTCTCGAGATGCTACGCCGCCTTCGCTAATGAAAATCGAGAGTATGTGATTGTTGGGGGTGGAAATGCTGCAGGATATGCTGGTCGAACGTTCGTCGAGCACGGCATGGCCGATGGACGTCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACCAAAGGTTATCTATTCCCGCCAGATAAGAACCCCGCGCGCCTTCCCGGATTTCACACTTGTGTTGGATCCGGTGGTGAGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGTTATATCAAGATCCAGTAAAAAGCATTGATATTGACCAGCAAACTCTGACAACAGATTCAGGAAAACTGCTGAAGTATGGTTCACTTATTATTGCGACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGAAATCTACCTGGTGTCCATTACATCCGTGATGTTGCAGATGCTGATTCACTAGTTTCATCATTGGGGAAAGCCCGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAGATTGCTGCTGCTGCTGTTGCCTGGCAGCTTGATACAACTATTATATTTCCAGAGGATCACTTATTGCAAAGACTATTCACTCCTTCTCTTGGTCGAAGATATGAAGAACTCTACCAGAAGAACGGTGTCAAAATCTTAAAGGGTGCTTCTATAAAAAACTTGGAAGCTGATTCTAATGGGCATGTGACTGCTGTAAAACTTGGAGATGGATCGACTATAGATGCTGATACAGTAGTTGTGGGAATCGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTGGGTCTGAATAAAGATGTTGGTGGCATACAGGTGGATGGCCTGTTTCGGACAAGTACTCCTGGAATCTTTGCCATTGGTGATGTAGCAGCTTTCCCACTGAAGATATACGATCGTATTGCCCGGGTTGAACATGTGGATCATGCTCGTCGCTCTGCACATCATTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCCCCAGGAAAGTTTGGTGGCAATTTTTCGGAGACAATGTTGGGGAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTGAATCTGGCAAGCTAAAAGGAGTTCTCCTTGAGAGTGGGAGCCCTGAGGAATTCCAGTTGCTGCCCAAACTTGCCAGAAGCCAGCCTGCTGTTGATAAAGCCAAGCTTGAAAAGGCATCTTCAGTGGAGGAGGCCCTAGCCATTGTTGGGGCAGCATTGGTTTGA 1689 0.4506 MHSCFWNLDIYIVSPWYDQHLFSTISFINFRLGRNVYRCVHQVLVFHWFALLLLYNSILFTLLIFRDFCFLVVRATVRRFAMAAISNSLSLKHGLSLWCPQTGSLSRLNSSSSIKFRTFSRCYAAFANENREYVIVGGGNAAGYAGRTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMLYQDPVKSIDIDQQTLTTDSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEIAAAAVAWQLDTTIIFPEDHLLQRLFTPSLGRRYEELYQKNGVKILKGASIKNLEADSNGHVTAVKLGDGSTIDADTVVVGIGAKPAVGPFERVGLNKDVGGIQVDGLFRTSTPGIFAIGDVAAFPLKIYDRIARVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPAVDKAKLEKASSVEEALAIVGAALV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1593 562 Gene3D - 466 552 IPR016156 GO:0016491|GO:0050660
Acco11g1593 562 PRINTS FAD-dependent pyridine nucleotide reductase signature 134 153 - -
Acco11g1593 562 PRINTS FAD-dependent pyridine nucleotide reductase signature 375 391 - -
Acco11g1593 562 PRINTS FAD-dependent pyridine nucleotide reductase signature 401 423 - -
Acco11g1593 562 PRINTS FAD-dependent pyridine nucleotide reductase signature 288 306 - -
Acco11g1593 562 PRINTS FAD-dependent pyridine nucleotide reductase signature 242 260 - -
Acco11g1593 562 PANTHER APOPTOSIS-INDUCING FACTOR 1 131 553 - -
Acco11g1593 562 Gene3D - 256 383 IPR036188 -
Acco11g1593 562 Gene3D - 134 448 IPR036188 -
Acco11g1593 562 Pfam Pyridine nucleotide-disulphide oxidoreductase 132 446 IPR023753 GO:0016491
Acco11g1593 562 PRINTS Pyridine nucleotide disulphide reductase class-I signature 288 313 - -
Acco11g1593 562 PRINTS Pyridine nucleotide disulphide reductase class-I signature 132 154 - -
Acco11g1593 562 PRINTS Pyridine nucleotide disulphide reductase class-I signature 376 390 - -
Acco11g1593 562 PRINTS Pyridine nucleotide disulphide reductase class-I signature 556 562 - -
Acco11g1593 562 PRINTS Pyridine nucleotide disulphide reductase class-I signature 416 423 - -
Acco11g1593 562 SUPERFAMILY FAD/NAD(P)-binding domain 127 453 IPR036188 -
Acco11g1593 562 FunFam Monodehydroascorbate reductase 466 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1593 Acco-ChrAcco11 30417414 30425995 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1593 233 443 Acyl Lipid Metabolism Gene Families AT1G48030 26.667 8.44e-11 62.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1593 11 30417414 30425995 Acco11g1593 11 30417414 30425995 ECH