Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1513 ATGAGCTCTCAAGTCTGCAGATCCGCTTCTAGAGCCGTGAGATCTTTTCTCTCTGCTTCCAGGGGCTCTCGCTTTTACTCCGAAGGGAGCACTGTAGCCGCCGCCGCCGCCGTTTCACTCACAAGGAAAGTCCCTCTTTTTGCTTCAAACATTGGGAAGTCTGAATCCGGAAATGGATCCAGAGCATGGCTTTCTGGGGTTCTCGCTCTTCCTGCTGCAGCTTACTTGCTCCAAGATCAAGAAGCACATGCTGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGAATCCAAAGAGGGCTGATTTCAGAGATCATATCTCGATTTGAGAGGAAAGGGTTCAAACTCGTGGGAATTAAAATATTGGTTCCTCAAAAAGATTTTGCACAGAAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGCCTTTGTGAATTCCTTAGCTCTGGTCCTGTTATTGCCATGGTCTGGGAAGGGCAGGGAGTTATTACCTATGGCCGAAAACTAATCGGGGCCACTGATCCCCAGAAATCTGAGCCTGGCACTATCAGAGGCGATTTGGCTGTCGTCGTTGGAAGAAATATCATCCACGGGAGTGATGGACCAGAGACTGCCAAAGACGAAATTAATTTGTGGTTCAAGCCAGAGGAGTTGGTAAATTACACAAGCAATGCAGAAAAGTGGATATATGGTGAAAACTGA 714 0.4762 MSSQVCRSASRAVRSFLSASRGSRFYSEGSTVAAAAAVSLTRKVPLFASNIGKSESGNGSRAWLSGVLALPAAAYLLQDQEAHAAELERTFIAIKPDGIQRGLISEIISRFERKGFKLVGIKILVPQKDFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGQGVITYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVNYTSNAEKWIYGEN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1513 237 SUPERFAMILY Nucleoside diphosphate kinase, NDK 87 234 IPR036850 -
Acco11g1513 237 Pfam Nucleoside diphosphate kinase 88 221 IPR034907 -
Acco11g1513 237 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 79 235 - -
Acco11g1513 237 SMART ndk_5 87 224 IPR034907 -
Acco11g1513 237 ProSitePatterns Nucleoside diphosphate kinases active site. 198 206 IPR023005 -
Acco11g1513 237 CDD NDPk_I 88 217 - -
Acco11g1513 237 Gene3D - 83 237 IPR036850 -
Acco11g1513 237 PRINTS Nucleoside diphosphate kinase signature 134 153 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 PRINTS Nucleoside diphosphate kinase signature 154 171 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 PRINTS Nucleoside diphosphate kinase signature 90 112 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 PRINTS Nucleoside diphosphate kinase signature 175 191 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 PRINTS Nucleoside diphosphate kinase signature 198 217 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 Hamap Nucleoside diphosphate kinase [ndk]. 87 222 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Acco11g1513 237 FunFam Nucleoside diphosphate kinase 83 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1513 Acco-ChrAcco11 29600504 29602781 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1513 11 29600504 29602781 Acco11g1513 11 29600504 29602781 ECH