Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1491 ATGTCCTTCACCAGTTTCATATTTAAAACCCAGTTGAAACCAGAACTAACTGGAACTGAGGTAGCCTTGGCTAAAGCCACCTTAGACAAAATAATGGGACGCACTTGCTCCAAACAACGTCTTCTGCATGAAGATCCAGCAGTTCTTGCTACCCAAACCTGCTTTAACGTATCTGAAATTCAAGGACTTTATGAGTTGTTCAAGGAGCTGAGTAGTTCTGTTGTTGATGACGGGCTCATCAGCAAAGAAGAGTTTCAGTTATGCTTATTGGGAAGTAGCAAGATACAGAATCTATTTGCAGACCGGGTTTTTCATTTATTTGACTCAAAAAATGATGGGGTGATAGAATTTGGTGAGTTTGTTCAAGCTCTAACTGTCTTCCATCCAGCTGCACCACAGGAACAAAAAGCTGCTTTTGCATTTCAAATTTATGATCTATGGCAAACAGGCTTCATTGGACGTGACGAGGTAAGAGAGCTGATACTGGCACTTTTAAGAGAGTCAGATTTGATTCTTTCTGAAGACTTAATTGAGGCCATAATTGATCAAGCATTTAAAGAAGCAGATTTAAAAGGAGACGGAAAGATCGATCTGGAGGAATGGAATGAATCTGCAGCTCAAAACCCATCCATACTGAAGAATATGACAATTCCATATTTTAAGGATCTTAATACTCGATTTCCTAGGGGATGA 693 0.3968 MSFTSFIFKTQLKPELTGTEVALAKATLDKIMGRTCSKQRLLHEDPAVLATQTCFNVSEIQGLYELFKELSSSVVDDGLISKEEFQLCLLGSSKIQNLFADRVFHLFDSKNDGVIEFGEFVQALTVFHPAAPQEQKAAFAFQIYDLWQTGFIGRDEVRELILALLRESDLILSEDLIEAIIDQAFKEADLKGDGKIDLEEWNESAAQNPSILKNMTIPYFKDLNTRFPRG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1491 230 Gene3D - 45 229 - -
Acco11g1491 230 FunFam calcineurin B-like protein 3 45 229 - -
Acco11g1491 230 Pfam EF-hand domain pair 77 124 IPR002048 GO:0005509
Acco11g1491 230 ProSiteProfiles EF-hand calcium-binding domain profile. 95 130 IPR002048 GO:0005509
Acco11g1491 230 Pfam EF hand 181 203 IPR002048 GO:0005509
Acco11g1491 230 SUPERFAMILY EF-hand 47 220 IPR011992 -
Acco11g1491 230 ProSiteProfiles EF-hand calcium-binding domain profile. 132 167 IPR002048 GO:0005509
Acco11g1491 230 PANTHER CALCINEURIN B 36 228 IPR045198 GO:0005509|GO:0019722|GO:0019900
Acco11g1491 230 CDD EFh 136 201 IPR002048 GO:0005509
Acco11g1491 230 PRINTS Recoverin family signature 103 124 - -
Acco11g1491 230 PRINTS Recoverin family signature 150 168 - -
Acco11g1491 230 PRINTS Recoverin family signature 196 216 - -
Acco11g1491 230 SMART efh_1 136 164 IPR002048 GO:0005509
Acco11g1491 230 SMART efh_1 180 208 IPR002048 GO:0005509
Acco11g1491 230 SMART efh_1 99 127 IPR002048 GO:0005509
Acco11g1491 230 ProSiteProfiles EF-hand calcium-binding domain profile. 176 211 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1491 Acco-ChrAcco11 29405723 29408000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1491 53 228 EF-hand Containing Proteins AT5G24270 59.659 4.93e-79 234
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1491 11 29405723 29408000 Acco11g1491 11 29405723 29408000 ECH