Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1471 ATGGCGATTGCTTCTCACCCGACTCCGAGCTTCTCACCTTCTTTCTGCTCTACTCGGACCCAATTCTCTCGCCTCGCGTGCTTCCCCTCCGTCACCCTGTCTCAGTCTCGCTCAAACCAAACTCGTTCATTAACTCGTCGACTTGTATCCTCTCGGCTCAATTCGTCTAAATTTTCCGATGCTGATGGCTCTATCTCGCCGGGCAGTGGAGATTTCCCCTACGAACTCCAACACGATTTTTCACCTCAGCGTCAGAGGAGGGGATCGCCGGTATACGTCACGCTTCCGTTAGGTTCCGTGGACGCGGAGGGGCGAGCCTTGAGGCAGAAAATTATGATGGCCTCTTTCAGGGCGCTCGCATTGGCTGGAGTAGAAGGCGTGGTTTTGGAGATTTGGTGGGGTTTAGTTGAGAGGAATGAGCCTATGGTTTATAATTGGCGAGGTTATTGCCAACTCGTCAAGTTGGCTGGGACGTTCGGCCTGAAGGTTCGAGTTGTCCTTGCGTTTCATCAGTGTGGCACGGACCCTACTGATCCTCATTGGATACCTCTTCCTCTATGGGTGCTTGATGAGATAAAAAATGATCCAGATTTAGTATATTCAGATAGGTTTGGGACAAAAAGTTCTGAATACATCTCACTTGGATGTGATGCACTTCCTGTACTCTGTGGACGTTCTCCAATTCAGGCATATGCTGATTTTATGAGGAACTTCAGGGACACCTTTAGGCCTTACTTTGGCATTATCATAACAGGGATACAGATTGGCATGGGTCCTGGTGGTGAATTAAGATATCCTTTAAGCCCTTCCCAATTAACCCATGACAGGCACTCTGAATTTGGAGAATTTCAGTGCTATGATAAGTATATGATTGCATCATTAAATGCTTGTGCAAGAGATATTGGAATGCCCGCATGGGGACAAGGAGCTCCACAGGACACTGGAAGTTTGAGGCGCAATTTGTTTTCTACTAGTAAGAATGGAAATGGCCCTCGGGACTCACCACAGGGTGAGTATCGCCCTTGGAACTTGCCAGAGGGTAGGTTTTTTCTCAAGTGGTACTCAGGGATGTTGCTTCTGCATGGAGAAAGAATTTGTAGGGAAGCTGAAGCTATATTTAGGGGTACAGAAGTCAACATATCAGCAAAAGTGGCTGCTATTCACTGGCACTACCTGACTGATTCTCATCCATCAGAGTTAACCGCAGGATATTACAATACTTCTAAGAGGGATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTATGGATTTGGCATATGCTGCTCAGGTTTTGAAATGCAAGATGCAGTAGTGAATGAGATAAACCCATCTGGCAGCCCGGAAGGTTTTCTTAAACAGCTGCTGTTGGCTGCTAGGCTCTGTGACATGCAACTTGAAGGTCAAAATTTTTCATCCAATTTAAATGATATATCATTCAAGCAGGTGCTGAAGATGTCAAAGTTTTATACAGAAGGGGCTGAAAAGCGTCCCTTCTCTTTTAACTTTATGAGGATGGGCAGGAAAATGTTTGGATCTGGTTTTTGGGACCGGTTTACTCGTTTTGTGAGGCAATTGTCAGATGGAAGTAATTTTCGAGCCAGACTAAATTCTGTTTGTGACGCACGTCACAAATCCTTGACCATGGCTAGGGCTGCAGAACCTGGAGTGCTCTACCAGCACTGCTAA 1689 0.4618 MAIASHPTPSFSPSFCSTRTQFSRLACFPSVTLSQSRSNQTRSLTRRLVSSRLNSSKFSDADGSISPGSGDFPYELQHDFSPQRQRRGSPVYVTLPLGSVDAEGRALRQKIMMASFRALALAGVEGVVLEIWWGLVERNEPMVYNWRGYCQLVKLAGTFGLKVRVVLAFHQCGTDPTDPHWIPLPLWVLDEIKNDPDLVYSDRFGTKSSEYISLGCDALPVLCGRSPIQAYADFMRNFRDTFRPYFGIIITGIQIGMGPGGELRYPLSPSQLTHDRHSEFGEFQCYDKYMIASLNACARDIGMPAWGQGAPQDTGSLRRNLFSTSKNGNGPRDSPQGEYRPWNLPEGRFFLKWYSGMLLLHGERICREAEAIFRGTEVNISAKVAAIHWHYLTDSHPSELTAGYYNTSKRDGYLPIARMFSKYGFGICCSGFEMQDAVVNEINPSGSPEGFLKQLLLAARLCDMQLEGQNFSSNLNDISFKQVLKMSKFYTEGAEKRPFSFNFMRMGRKMFGSGFWDRFTRFVRQLSDGSNFRARLNSVCDARHKSLTMARAAEPGVLYQHC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1471 562 MobiDBLite consensus disorder prediction 317 332 - -
Acco11g1471 562 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 34 533 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 Gene3D Glycosidases 80 556 - -
Acco11g1471 562 Pfam Glycosyl hydrolase family 14 93 520 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 MobiDBLite consensus disorder prediction 317 340 - -
Acco11g1471 562 SUPERFAMILY (Trans)glycosidases 88 534 IPR017853 -
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 378 394 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 413 436 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 342 361 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 395 406 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 123 137 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 166 187 IPR001554 GO:0000272|GO:0016161
Acco11g1471 562 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 144 162 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1471 Acco-ChrAcco11 29260832 29263778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1471 90 533 Glycoside Hydrolase AT4G17090 45.190 4.27e-135 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1471 11 29260832 29263778 Acco11g1471 11 29260832 29263778 ECH