Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1460 ATGATGGACACTCTCAAGTACCTCATGGGCTCGCCGGGCTCGTCGGGGTTTGGCTCTGGCTCCACCGCCGAACAAGTCACCGACACCACCATCTCCTCCTCCCATTTGTCCTCTCTCACCGCTATCATCACAGGCGCAACGTCGGGGATCGGAACTGAAACAGCGAGGGTTCTGGCGAAGCGAGGAGTGAGGTTGATTCTGCCGGCGAGAACACTGAAAGCCGCCGAAGAAACTAAAGCTCGCATCCTCTCTGAGTCTCCGAACTCACACATCATTGTGATCCCTCTCGATCTTAGTTCTCTTAGCTCTGTTCGCTCCTTCGTCTCTCATTTCCATTCCCTTCATTTACCTCTCCACCTTCTCATAAACAACGCCGGAAAGTTCGCCCACCATCACGCAATCTCTGAAGATGGATTTGAAATGTCCTTCGCCACTAATTATCTAGGTCATTTTCTGTTGACGGACTTGTTGTTGAAGACGATGGTGGAAATGGCAGAGAAGTCGGGGATCCAAGGACGGATCGTGAACGTGTCTTCCAACGTACATGGCTGGTTTTCCGGCGACATTATCCGGTATCTAGCTCTTATTACACGCCATAAAAGCCATTACGACCCCACACGTGCTTATGCTCTGTCCAAGCTCGCCAACATCTTACACACCAAGCATCTTGCTCTCAAACTTCAGGAAATGGGAGCCAACGTGACTGCGAATTGCGTTCATCCGGGGATTGTGAGAACCAGGCTCACCAGGGAACGTGAAGGCTTACTGACAGATATAGGGTTCTTGCTGACTTCCAAGTTCCTGAAAACCATTCCCCAGGCAGCAGCAACGACATGTTACGTGGCGACGCATCCGAGGCTGCTAAATGTGTCCGGCAAGTACTTTGCTGACTGCAACGAAGCTTCCACGTCAAAACTCGCAGCGAATTCATCGGAAGCTGCTAGGTTGTGGACAGCTTCTGAGTGCATGATCTCTGACGGTCCCAAATCTCTTGTTGATCTCCTCCACAATGAATGA 1017 0.5113 MMDTLKYLMGSPGSSGFGSGSTAEQVTDTTISSSHLSSLTAIITGATSGIGTETARVLAKRGVRLILPARTLKAAEETKARILSESPNSHIIVIPLDLSSLSSVRSFVSHFHSLHLPLHLLINNAGKFAHHHAISEDGFEMSFATNYLGHFLLTDLLLKTMVEMAEKSGIQGRIVNVSSNVHGWFSGDIIRYLALITRHKSHYDPTRAYALSKLANILHTKHLALKLQEMGANVTANCVHPGIVRTRLTREREGLLTDIGFLLTSKFLKTIPQAAATTCYVATHPRLLNVSGKYFADCNEASTSKLAANSSEAARLWTASECMISDGPKSLVDLLHNE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 116 127 IPR002347 -
Acco11g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 209 228 IPR002347 -
Acco11g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 232 249 IPR002347 -
Acco11g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Acco11g1460 338 PRINTS Glucose/ribitol dehydrogenase family signature 166 182 IPR002347 -
Acco11g1460 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 301 IPR036291 -
Acco11g1460 338 Gene3D - 28 326 - -
Acco11g1460 338 PANTHER RETINOL DEHYDROGENASE 15 323 - -
Acco11g1460 338 Pfam short chain dehydrogenase 40 181 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1460 Acco-ChrAcco11 29156118 29157918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1460 35 250 Acyl Lipid Metabolism Gene Families AT1G63380 27.149 9.38e-11 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1460 11 29156118 29157918 Acco11g1460 11 29156118 29157918 ECH