Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1411 ATGGCGAGTGATTCTGGCGCGAAACCTGCCCCTGCTTCTTCGTCCTCCTCAACCGCAGAGGAATCCTACATTGGGAGCTTTATCAGTCTGATTTCCAAGTACGAGATTCGTTACGAAGGCGTTTTGTATCACCTCGACGTCCGTGATTCCACCATTGGTTTGAAGAGCGTCAGATCTTATGGGACAGAGGGGAGAAGAAAAGATGGTGCTCAGGTTCCTCCAAGTGATAAGGTTTATGAATTCATTCTTTTTCGAGGGAGTGACATTAAGGATTTGCAGGTCAAATCCCCTCCTACATCTACCAAAGAAGAGCAGATATTCAGTGATCCAGCTATCATCCAGTCACAATATTCTGAAGTTCCTTCAAGGTCTCCCACAACTTCAGTGGGTGGGATCAGTTTAACAGAATCAATTCAAAAGTTAGATACTCCTGCTATGATCAGTAGAGACATTCCTCGTTCTGTTGGGATGCCTTCTCATCAATCTGCAATGTTGACGGGCTTATCAACTCAATCTGCTGCTACTCATGTTTCTGGTGCCCCTTCTTTCTCTACAACAATGTATTGGCCAGAATATAGTGGGATATCAGGAAGCAGCTCTCATTCTCTGCTGCACTCTAGTCCTTTTCAGTCCCCTTCAGTTGTGGCACCTTTAAATACACAGAGATGGTCCCAAACTCCAGAAAGTCAGTTACCTTCTTCAAAAGTGGGCTGGACTACTTTACCAGAGCATGTTGAACCTGTCTCATCTGTTACTGCTTCATCTCTCGTAAATCCGTCTTATGAACTTTCATCTTTCTCTTTACAAACTTCTGGTTCTATAGATGCTCCATCACTTTTCTCTTTGAAGACACCGTTGCCCTATCATTCTTCTTTGGCTGAATCAAACATGCCTTCAGTTTCTTCACCGTTTCAAGGCATAAATTCTGTCAAAGATCAATTTCCTGGTCAAATTTCTCACATGGGATCAATGTTTCCTAGACAATCTGCCCATCATTCTGTTTCTCCTTTGATTGATTCTACTTCAGGCTCCCCGCCAAGACCTCCATCTTTTTTGACTCCAGATCAGTTTGCTCCTCCCACACAGGATTTTGTATCTTTAGTGCAGAACCAGATCCCTGATCAGAATCATGTGGGTTCTCTGGCACCAACATCCTCTAGCTCCTCTTTTCTAGTACCTTCTCCAGAATTTCAAGCACCATTGTTGCCTTCACCACCATTGCCAACATCAGTGCGCAAGCCTCAGCACTCAGCTTCACAGTTCAGTGAAGAGTTTGATTTTGAGGCCATGAACGAGAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTTGGGAGGGCATCTAAGACAATAGAAGGATTGGAGGATAATGCTCCAACTGACAGCTTGGGTGACACAGTGTGTCGTGTGTTTCAACCTAACCCAAACACTATGTCTGCATATAAGAAAGATGACTTTTTTGACACAATTTCGTGCAACTCTCTCGGTCATGGATCAAGGAATGGACAGAACCGCCTATCTGAGAGGATGAAGTTGGATTCTGAAACGTTTGGCAATTTTCCTCGGAGCCCTGCAATGGGTTATGCTGCCTATGGCAGTGGACGTGGTGAAAATTACCGGAGTTCATACAATATGGGAAGGGGTTATAGCTATTATGGTGGAAGAGGGCGCGGCAGGAATATGCCTTTCTATTAG 1692 0.4439 MASDSGAKPAPASSSSSTAEESYIGSFISLISKYEIRYEGVLYHLDVRDSTIGLKSVRSYGTEGRRKDGAQVPPSDKVYEFILFRGSDIKDLQVKSPPTSTKEEQIFSDPAIIQSQYSEVPSRSPTTSVGGISLTESIQKLDTPAMISRDIPRSVGMPSHQSAMLTGLSTQSAATHVSGAPSFSTTMYWPEYSGISGSSSHSLLHSSPFQSPSVVAPLNTQRWSQTPESQLPSSKVGWTTLPEHVEPVSSVTASSLVNPSYELSSFSLQTSGSIDAPSLFSLKTPLPYHSSLAESNMPSVSSPFQGINSVKDQFPGQISHMGSMFPRQSAHHSVSPLIDSTSGSPPRPPSFLTPDQFAPPTQDFVSLVQNQIPDQNHVGSLAPTSSSSSFLVPSPEFQAPLLPSPPLPTSVRKPQHSASQFSEEFDFEAMNEKFKKDEVWGSLGRASKTIEGLEDNAPTDSLGDTVCRVFQPNPNTMSAYKKDDFFDTISCNSLGHGSRNGQNRLSERMKLDSETFGNFPRSPAMGYAAYGSGRGENYRSSYNMGRGYSYYGGRGRGRNMPFY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1411 563 MobiDBLite consensus disorder prediction 324 346 - -
Acco11g1411 563 Pfam FDF domain 420 518 IPR019050 -
Acco11g1411 563 SMART LSM14_2 17 117 IPR025609 -
Acco11g1411 563 MobiDBLite consensus disorder prediction 375 394 - -
Acco11g1411 563 MobiDBLite consensus disorder prediction 324 358 - -
Acco11g1411 563 ProSiteProfiles DFDF domain profile. 413 449 IPR025762 -
Acco11g1411 563 ProSiteProfiles FFD box profile. 478 493 IPR025761 -
Acco11g1411 563 Pfam Scd6-like Sm domain 23 96 IPR025609 -
Acco11g1411 563 CDD LSm14_N 23 94 IPR025609 -
Acco11g1411 563 PANTHER SCD6 PROTEIN-RELATED 20 559 - -
Acco11g1411 563 ProSiteProfiles TFG box profile. 500 520 IPR025768 -
Acco11g1411 563 Gene3D - 13 98 - -
Acco11g1411 563 SUPERFAMILY Sm-like ribonucleoproteins 22 98 IPR010920 -
Acco11g1411 563 SMART FDF_2 419 520 IPR019050 -
Acco11g1411 563 ProSiteProfiles Sm domain profile. 15 98 IPR047575 GO:0003723
Acco11g1411 563 MobiDBLite consensus disorder prediction 375 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1411 Acco-ChrAcco11 28536832 28541398 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1411 11 28536832 28541398 Acco11g1411 11 28536832 28541398 ECH