Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1386 ATGGATGCTATAAGGAAGCAAGCTAGCAAATTAAGGGAGCAAGTTGCAAAACAGCAGCAGGCTATACTTAGACAATTAGGCCAAATTAGCAATGAACCGCTAATAACTGATGAATCAGAAGTTCAATGTCGTCAACAACTGCGAAAATTGTACAGTTCTACCAAAGCAGCCAAGAATTTTCAGCGGCATATTGTTCGTGGTATTGAAGGTTTAACCTCTGTTAGTTTGAAGCAGATGGACATAGTGACGAAGTTGGCTAAAGACTGTTTTAAGTATGGGACTGAGAATGAAAGCAGTAAATATCCTCTTGCAAGGGCTTCTCTTCACTTGGGTAACTCATATGATTTAATGGAAAATGAAAGGGAGACTTTGCTTGCAATCTACAGTCATCAGGTATCTGAGTCATTACGAGCACAAATTACAGGAGCTCCTTTAGAGGATGCACGCCACCTCACTTATCGTTATGACAAGCTTTTTCAAGAGGTAGAAGCTCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGGATTCTTCTGTTTCTGCAGAGAACTCCTTGAAGATTCAAAATGCAGAGGCAAGGTTGAAAGAACTTAAATCAGCATTGGTGGCGCTTGGTAGAGAAGCAACTGCTGCCATGGTGTCAGTTGAAGATGAACAACAGCAGATAACTCTCAAGAGCCTTCGTACAATGGTGGATGCTGAGAGAGCTTATCATGAGCATGCCCTTGTTATTTTAGAGAAGCTATATTCTGAGATGATTCTGGAGAAGCAATCAAAAGAGTCTCCTTCCATACCAATGCCAAGAGATGGTCATACTCAACCTGTATCTGAGAACGCTAATCTATATGGTTTTGATCATCTAAGCAAGGATCCAAGTGGTACCTATTATTTTGCAAAGGTGGTACACCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTTTATCAGTTGGTGATTATGTTGTAGTTCGGCAGGTATCTGCGCATGGATGGTCTGAAGGAATATGCAAAGGTAATGCTGGATGGTTCCCCTCTGCATATGTAGAGAGAGAGGACAAGATACCAGCGAGCATGATAATGGAAATAACATCAAAATCTTGA 1104 0.4167 MDAIRKQASKLREQVAKQQQAILRQLGQISNEPLITDESEVQCRQQLRKLYSSTKAAKNFQRHIVRGIEGLTSVSLKQMDIVTKLAKDCFKYGTENESSKYPLARASLHLGNSYDLMENERETLLAIYSHQVSESLRAQITGAPLEDARHLTYRYDKLFQEVEAQAAEVLRRRSKLRDSSVSAENSLKIQNAEARLKELKSALVALGREATAAMVSVEDEQQQITLKSLRTMVDAERAYHEHALVILEKLYSEMILEKQSKESPSIPMPRDGHTQPVSENANLYGFDHLSKDPSGTYYFAKVVHPFDAQAEGELSLSVGDYVVVRQVSAHGWSEGICKGNAGWFPSAYVEREDKIPASMIMEITSKS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1386 367 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Acco11g1386 367 SMART SH3_2 298 353 IPR001452 GO:0005515
Acco11g1386 367 Coils Coil 1 21 - -
Acco11g1386 367 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Acco11g1386 367 Coils Coil 182 209 - -
Acco11g1386 367 Gene3D SH3 Domains 297 352 - -
Acco11g1386 367 PANTHER SH3 DOMAIN-CONTAINING 18 351 - -
Acco11g1386 367 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Acco11g1386 367 Coils Coil 159 179 - -
Acco11g1386 367 SUPERFAMILY SH3-domain 297 356 IPR036028 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1386 Acco-ChrAcco11 28183542 28189051 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1386 11 28183542 28189051 Acco11g1386 11 28183542 28189051 ECH