Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1384 ATGCCTCAAGAGCTTGAGCAGCTGGGCCTTGGGTCCTATCGAAGGAGCTTGTCAAGGAGGCGCTCCTTAAGGGCTGGAGCAGATACGGATGATAGGGGGTGGACCCCACTTCATGTTTGCGCTCGCAAAGGAGATCTCAAATTGGTTAAAAAGTTTATTGATGAAGGAATGGATGTGAATGTTATTGCATGGGGTCCAAAATCAAAAGGTGTGACCCCACTTCATCTTGCTGCTGAAGGTGGCCATCTTGAAGTCATGGATGAATTACTTGAGCGTGGTGCTGACATTGATGCTAGGACTAAGGGGGCTTGTGGATGGACACCTCTCCACATTGCAGCTAAAGAAAGGAGTAGGGCAGCGGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGCCTCCTGATATCAACGATTGCAGATTTAATCCCCCAGTTCATTATTGCCCTGGACTTGAATGGGCCTACGAGGAAATGAAGCGACTTCGATATGAAAACTCATCACCATCTGAGGAGACCTCTTGCAGCTCAGAAAGCTGA 534 0.4794 MPQELEQLGLGSYRRSLSRRRSLRAGADTDDRGWTPLHVCARKGDLKLVKKFIDEGMDVNVIAWGPKSKGVTPLHLAAEGGHLEVMDELLERGADIDARTKGACGWTPLHIAAKERSRAAVKFLVENGAFLPPDINDCRFNPPVHYCPGLEWAYEEMKRLRYENSSPSEETSCSSES 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1384 177 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 29 145 - -
Acco11g1384 177 ProSiteProfiles Ankyrin repeat region circular profile. 104 129 - -
Acco11g1384 177 ProSiteProfiles Ankyrin repeat profile. 104 129 IPR002110 GO:0005515
Acco11g1384 177 ProSiteProfiles Ankyrin repeat region circular profile. 32 61 - -
Acco11g1384 177 Pfam Ankyrin repeat 104 129 IPR002110 GO:0005515
Acco11g1384 177 PRINTS Ankyrin repeat signature 33 48 IPR002110 GO:0005515
Acco11g1384 177 PRINTS Ankyrin repeat signature 85 99 IPR002110 GO:0005515
Acco11g1384 177 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Acco11g1384 177 Pfam Ankyrin repeats (3 copies) 25 99 IPR002110 GO:0005515
Acco11g1384 177 Gene3D - 12 65 IPR036770 -
Acco11g1384 177 SMART ANK_2a 104 137 IPR002110 GO:0005515
Acco11g1384 177 SMART ANK_2a 32 61 IPR002110 GO:0005515
Acco11g1384 177 SMART ANK_2a 69 98 IPR002110 GO:0005515
Acco11g1384 177 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Acco11g1384 177 SUPERFAMILY Ankyrin repeat 29 147 IPR036770 -
Acco11g1384 177 Gene3D - 66 166 IPR036770 -
Acco11g1384 177 ProSiteProfiles Ankyrin repeat profile. 32 64 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1384 37 159 Acyl Lipid Metabolism Gene Families AT5G53470 34.146 7.51e-12 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1384 11 28161166 28162758 Acco11g1384 11 28161166 28162758 ECH