Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1308 ATGGATCGAAATGGGGGAGAGAGCTGGAGGGAATTGATGAAGAAGATGCTTCCTCCTGGAGCTTCTCTGCCAGAAGATGCTTCTGATCTTGACTACTCCATAGCCATAGAATACGAGGGTCCACCAGTCTCCTACGACGTACCACGAGTTGATCCTCTTAGTGTGAAGCCTCGAGGAGTTTCACGTTCTGAAACACAACAATCCATTTCTCATGTGAGGCCTCCAGTAGTTGAACCAATTCCTCTGCCAGTGTCTCGTATTGCTGGCGTGACAGGTTCTCCCAATCAAAGCCCTGGGATGTCAGGAAGTTCAGAATCTGTAGTGTCTGTCTTGCAAAATCCTGACTCTTCTTCTGCTTCAGCTTCAGCCTCACCTGGTTCGGCTCATAATCCTCCTAGGCAAGAGGTTAATGAACCAAGGAGGGCACATGTTGTCACTTTTAATACTGTTGATAGATCTGAAAGGAAAGAAGCTGAAGTTATGAGGCCAGTTTATCCAGAATATGTTGGAGTTTCAAAGGAAAGGAGGAAGAAGAAGAAATTCAGAGTTTGTTATAGATGTAGAAAAGGGAAGTGGGAAACTAAGGAATCTTGCCTAGTTTGTGATGCCAAATATTGTAGAAATTGTGTTCTTAGGGCCATGGGATCAATGCCTGAAGGGCGCAAATGCATAACTTGCATCGGTCAGCCTATAGATGAATCAAAGCGTATGAAGTTAGGTAAACATTCGAGAGTATTATCTCAACTTATTATTCCTCTAGAAGTTAAGCAAATTATGAGAGCAGAGAAGGAATGCTCTGCTAATCAACTTCGACCGGAGCAGCTGATGGTTAATGGATTCCCACTGAAGCCTGAAGAGATGGCAGAATTACTTGGGTGCCCCTTGCCTCCACGGAAGCTGAAGCCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAAAATCATAAGTTCAAACTTGAACTTCACTGGGAAACTTTGCCCTGATGCTAGTAATGGAAACACAAGAGTTTACATCAATGGTCGAGAGATTACAAGGCTTGAATTGAGGATACTAAGGCTGGCAAATGTACAGTGTCCACGTGATACCCACTTCTGGGTTTATGAGGATGGTCGCTATGAGGAAGAAGGTCAGAATAATATCAAAGGAAACATTTGGAATAAGGCTTCAACAAGATTTGTTTGTACCTTGTTCTCCTTACCCTTTCCCCATGGAAAGCCTCATGCACCAAGAGATGAGATTAGTAATTATACTGTTCCAAAATATCCGGAACAGAAAAAGGTTCAGAAGCTTCTTCTTCTTGGACTTCAAGGATCAGGAACTAGCACAATCTTTAAGCAGGCTAAATTCTTGTATGGAAGCAGATTTACTGAAGAAGAGCTACAAGATGTCAAACAGATGATCCAGAGTAACATTTACAAATATCTTAGCATTTTGCTTGATGGAAGAGAGCGCTTTGAAGAGGAGGCTCTTTCTGAAATGGATGCGCAAAGTTCTTCTGGTCAAACTATGGGACAAGTTGGGAACAGTGAATCAAATGATACTAGTCTATGCATCTATTCGCTCAACCCGAGGCTAAAGCATTTCTCCGATTGGCTCCTGGACATAATAGCTACTGGGGATTTAGATGCCTTCTTCCCAGCAGCTACGCGTGAGTATGCACCATTAGTTGAAGAAGTGTGGAAGGATCCAGCAATACAGGAAACCTATAAAAGAAAAGATGAGCTTCACTTTCTTCCTGATGTGGCACAATATTTCTTAAGCCGAGCTATTGAGATATCCAGCAACGAATACGAACCATCGGAAAGAGACATCATATATGCAGAAGGGGTTACTCAAGGGAATGGTTTAGCTTGCATAGAATTCTCACTTGATGACCGTAGCCCAATGTCTGAAGTTTACACGGAAAATATGGAAGCTCATCCTCCACCTCTGACCAAGTACCAACTGATAAGAGTAAATGCCAAGGGGATGAATGAAGGCTGTAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTCTTCTGCGTCTCACTGAGTGACTTTGACCAGTTATCTCTTGGCGCCCCAGACGGTAGTGGCAGTGGAAGCCTTCTACAAAACAAGATGCTACAGAGCAAGGAGCTATTTGAGACAATGGTGAGGCACCCTTGCTTCAAAGACAGTCCTTTTGTATTGATTCTGAACAAATATGATATCTTTGAGGAAAAAGTAAATAGGGTGCCTCTATCTGCCTGCGAATGGTTCAATGATTATAGCCCTGTGAGTGCTCATCACAATAGCCAGTCACTGGCCCAACAGGCTTACTTCTACATCGCCATGAAATTCAAAGACCTTTACGCTTCCCTCACCGGCCGGAAACTTTTCGTGTGGCAAGGCCGGGCAAGGGACCGTGTGACCGTTGATGAGGCTTTCAAGTACATAAGGGAGGTCCTCAAGTGGGATGAGGAAAAAGACGAGAACTACTATGCTCCGCCTGAAGATTCATTTTATAGTACTACAGACATAAGTTCCTCTCCTTATATCAGGCAAGAGCAGTAA 2571 0.4364 MDRNGGESWRELMKKMLPPGASLPEDASDLDYSIAIEYEGPPVSYDVPRVDPLSVKPRGVSRSETQQSISHVRPPVVEPIPLPVSRIAGVTGSPNQSPGMSGSSESVVSVLQNPDSSSASASASPGSAHNPPRQEVNEPRRAHVVTFNTVDRSERKEAEVMRPVYPEYVGVSKERRKKKKFRVCYRCRKGKWETKESCLVCDAKYCRNCVLRAMGSMPEGRKCITCIGQPIDESKRMKLGKHSRVLSQLIIPLEVKQIMRAEKECSANQLRPEQLMVNGFPLKPEEMAELLGCPLPPRKLKPGRYWYDKESGLWGKEGEKPDKIISSNLNFTGKLCPDASNGNTRVYINGREITRLELRILRLANVQCPRDTHFWVYEDGRYEEEGQNNIKGNIWNKASTRFVCTLFSLPFPHGKPHAPRDEISNYTVPKYPEQKKVQKLLLLGLQGSGTSTIFKQAKFLYGSRFTEEELQDVKQMIQSNIYKYLSILLDGRERFEEEALSEMDAQSSSGQTMGQVGNSESNDTSLCIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETYKRKDELHFLPDVAQYFLSRAIEISSNEYEPSERDIIYAEGVTQGNGLACIEFSLDDRSPMSEVYTENMEAHPPPLTKYQLIRVNAKGMNEGCKWVEMFEDVRAVVFCVSLSDFDQLSLGAPDGSGSGSLLQNKMLQSKELFETMVRHPCFKDSPFVLILNKYDIFEEKVNRVPLSACEWFNDYSPVSAHHNSQSLAQQAYFYIAMKFKDLYASLTGRKLFVWQGRARDRVTVDEAFKYIREVLKWDEEKDENYYAPPEDSFYSTTDISSSPYIRQEQ 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1308 856 SMART galpha_1 418 800 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 Pfam G-protein alpha subunit 432 821 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 MobiDBLite consensus disorder prediction 1 27 - -
Acco11g1308 856 MobiDBLite consensus disorder prediction 837 856 - -
Acco11g1308 856 ProSiteProfiles G-alpha domain profile. 436 833 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 Gene3D - 466 618 IPR011025 GO:0007165
Acco11g1308 856 CDD G-alpha 451 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 MobiDBLite consensus disorder prediction 87 140 - -
Acco11g1308 856 MobiDBLite consensus disorder prediction 832 856 - -
Acco11g1308 856 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 214 825 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 MobiDBLite consensus disorder prediction 89 131 - -
Acco11g1308 856 MobiDBLite consensus disorder prediction 41 71 - -
Acco11g1308 856 PRINTS Alpha G protein (transducin) signature 734 743 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 PRINTS Alpha G protein (transducin) signature 439 454 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 PRINTS Alpha G protein (transducin) signature 607 629 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 PRINTS Alpha G protein (transducin) signature 680 708 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Acco11g1308 856 FunFam Extra-large guanine nucleotide-binding protein 3 632 831 - -
Acco11g1308 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 829 IPR027417 -
Acco11g1308 856 FunFam Extra-large guanine nucleotide-binding protein 3 466 618 - -
Acco11g1308 856 Gene3D - 627 831 IPR027417 -
Acco11g1308 856 SUPERFAMILY Transducin (alpha subunit), insertion domain 465 617 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1308 Acco-ChrAcco11 27279073 27283706 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1308 11 27279073 27283706 Acco11g1308 11 27279073 27283706 ECH