Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1284 ATGTCGATAAAAACTGTTAAAGTCAGTAATCTTTCTCTGGGAGCAACTGAACAAGACATTAAGGAGTTTTTTTCTTTTTCTGGTGATATTGAATATGTTGAAATGAGGAGTCATGATGAACGATCTCAAATTGCTTATGTCACTTTCAAGGATGCACAAGGAGCTGAAACTGCTGCCCTACTATCTGGAGCAACGATTGTTGATTCGTCAGTTACAGTAACTTTGGATCCAGATTACCGGCTTCCACCAGCTGCTTCTACATCACCTGTAACTGAAAGTAAGACTCCTGGTGGTGCTGAATCTGCTTTAAGAAAGGCAGAGGATGTGGTCACCAGCATGCTGGCGAGGGGCTTTGTTCTGGGGAAAGATGCTGTCAACAAAGCAAAGACATTAGATGAGAAGCATCAGTTATCATCAACTGCATCATCAAAAGTTGCTTCTTTTGATCAGAAAATTGGTTTCAGTGAGAAAATAACTGCTGGCGCTTCAGCCGTGGGTGGTCGAGTTCGAGAAGTGGATCAAAAGTTTCAGGTTTCTGAAAAAACCAAAACGGCATTTGCAGCCGCAGAACAGAAAGTCAATGAAGCAGGTTCTGCTATCATGAAAAATCGCTATATACTCACTGGAACTTCATGGGTAACAGGTGCTTTCAGCAAGGTTGTTAAGGCAGCTGAAGATGTAGGACAGAAGACAAAGGAGAAAGCGCGCAGTACAGAAGAGGAACGGAAGCTATAG 735 0.4272 MSIKTVKVSNLSLGATEQDIKEFFSFSGDIEYVEMRSHDERSQIAYVTFKDAQGAETAALLSGATIVDSSVTVTLDPDYRLPPAASTSPVTESKTPGGAESALRKAEDVVTSMLARGFVLGKDAVNKAKTLDEKHQLSSTASSKVASFDQKIGFSEKITAGASAVGGRVREVDQKFQVSEKTKTAFAAAEQKVNEAGSAIMKNRYILTGTSWVTGAFSKVVKAAEDVGQKTKEKARSTEEERKL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1284 244 Gene3D - 2 74 IPR012677 -
Acco11g1284 244 MobiDBLite consensus disorder prediction 81 102 - -
Acco11g1284 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 66 IPR000504 GO:0003723
Acco11g1284 244 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 238 - -
Acco11g1284 244 SUPERFAMILY RNA-binding domain, RBD 3 77 IPR035979 GO:0003676
Acco11g1284 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Acco11g1284 244 MobiDBLite consensus disorder prediction 225 244 - -
Acco11g1284 244 SMART rrm1_1 5 74 IPR000504 GO:0003723
Acco11g1284 244 Coils Coil 221 241 - -
Acco11g1284 244 FunFam RNA recognition motif-containing protein 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1284 Acco-ChrAcco11 26907562 26910736 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1284 11 26907562 26910736 Acco11g1284 11 26907562 26910736 ECH