Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1269 ATGGGGAAGAAGAAACCCAAGGAGCCTCAGGAAACCCCTAAAAGCAACGGTACTTCTGACATATTTAGCAAGCTATTTGGTAATGCATCGGAACAGGGCGTCAGCTCTTCTCTATTCTCAGATAGCAACCCCTTTCGGAAGAAGCCTCTTGAAACTGGTTCAAGTTTCGGCGTAACAAATAACACTGAAAATGCTGGTAGCGCGGTCTCCGATAGCCCCAATTCTGAAGTGCTGAAGAAGGGGAAGAAACGCAAAGAGAAGAACTTGTCTGTTGATTCATATGATACCTTTGAAGCTTCGGGGAAGAAGTCGAAATCCGGTTCCGATTTGGGTGCGCAGGTGACGACTACATTGCCGAAGGAAGAAAATCTTTTGTCTAAGGAAGGCGAGCAAAAAGGTGAGCTTGTGGATGATGGCAAGAAGAGAAATAACAACAAGAGGAAAAGGGATGACATTGAGAAAGAGTGGGAATTAAAGAGGTATGGGGCAGTGGAGGAAGAGCAAGATGATGGGGAAGGCTTGGGGAAAAATGTTGTTGGGAGCAAGAGGAAGACGGTGGATAATCCTGCCGACATGTTGGTAGCGAATGAAGGTTTTGATGATGAGAAAAAGCTCTTGAGAACCATCTTTGTTGGGAATTTACCGCTCAAGGTGAAAAAGAAGACTTTATTGACGGAGTTTAAGAAATTCGGGGAGGTTGAATCATTGAGGATTCGTTCCGTTCCAATATTAGATACCAAAAAACCTAGGAAGGGAGCTATCCTTTCGAAGAAAATTAATGATGCTGGTGATAGTGTTCATGCGTACATTGTTTTTAAGACAGAGCAGTCAGCTCAGGATTCTTTGTCCCATAACCTGACTGTGGTTGGAGGAAATCACATTCGTGTTGACAGAGCATGCCCTCCTCGCAAGAAACTTAAAGGAGAGCATACTCAATTGTATGATAACAAGAGAACTGTTTTTGTTGGCAACCTCCCATTTGATGTAAAGGATGAAGAACTATATAAACTGTTTTGTGGCATGTCCAATCTTGAATCCAGCATAGAAGCAGTTAGAGTCATTAGAGATCCTCATTTAAATATTGGGAAGGGTATCGCCTATGTGCTGTTTAAAACAAGGGAAGCTGCTAATTTTGTTCTTAGGAAACGGAACTTGAAGCTTCGAGACCGAGAGCTGAGACTCTCTCATGCAAAAGCTGATGCCACCCCATCCAAAAGGCCAAACCCGTCAACACCACAAGCTTCTGGTACACCTGCAAAGAAGGCAGCGGTGGCTTTGTCAAGGTCTCCTCCAAGCAGTGCTTACAGGACAAATAAGAAGTCCAATATGTCTTACCAAGGTCTGCGGGCAAACAAAACCATCGCCCATAAGAAACCGGGAACCCCCGGAGGTGAGAAAACGACTGAGCGCAAGGCGAAAAGACCAGCAGTTGCTGCCAGAAGGGCTAAATTAAAAGCAACATTGCCAAAGGAAGATGGCTCAGCAAAACAAGCGGGAAGGAAACGCAAGCTTGATAGTAGAACTCCAGAAAGCTCCCTACGAAGTAAGAAAGTTAAGAAGAATTGGTAG 1569 0.4449 MGKKKPKEPQETPKSNGTSDIFSKLFGNASEQGVSSSLFSDSNPFRKKPLETGSSFGVTNNTENAGSAVSDSPNSEVLKKGKKRKEKNLSVDSYDTFEASGKKSKSGSDLGAQVTTTLPKEENLLSKEGEQKGELVDDGKKRNNNKRKRDDIEKEWELKRYGAVEEEQDDGEGLGKNVVGSKRKTVDNPADMLVANEGFDDEKKLLRTIFVGNLPLKVKKKTLLTEFKKFGEVESLRIRSVPILDTKKPRKGAILSKKINDAGDSVHAYIVFKTEQSAQDSLSHNLTVVGGNHIRVDRACPPRKKLKGEHTQLYDNKRTVFVGNLPFDVKDEELYKLFCGMSNLESSIEAVRVIRDPHLNIGKGIAYVLFKTREAANFVLRKRNLKLRDRELRLSHAKADATPSKRPNPSTPQASGTPAKKAAVALSRSPPSSAYRTNKKSNMSYQGLRANKTIAHKKPGTPGGEKTTERKAKRPAVAARRAKLKATLPKEDGSAKQAGRKRKLDSRTPESSLRSKKVKKNW 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1269 522 MobiDBLite consensus disorder prediction 395 522 - -
Acco11g1269 522 MobiDBLite consensus disorder prediction 1 148 - -
Acco11g1269 522 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 318 399 IPR000504 GO:0003723
Acco11g1269 522 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 298 511 - -
Acco11g1269 522 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 251 IPR000504 GO:0003723
Acco11g1269 522 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 320 392 IPR000504 GO:0003723
Acco11g1269 522 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 301 IPR000504 GO:0003723
Acco11g1269 522 MobiDBLite consensus disorder prediction 12 74 - -
Acco11g1269 522 MobiDBLite consensus disorder prediction 123 148 - -
Acco11g1269 522 SUPERFAMILY RNA-binding domain, RBD 202 308 IPR035979 GO:0003676
Acco11g1269 522 CDD RRM1_RBM34 207 297 - -
Acco11g1269 522 Gene3D - 307 406 IPR012677 -
Acco11g1269 522 Gene3D - 202 306 IPR012677 -
Acco11g1269 522 CDD RRM2_RBM34 319 395 IPR034221 -
Acco11g1269 522 SMART rrm1_1 208 297 IPR000504 GO:0003723
Acco11g1269 522 SMART rrm1_1 319 395 IPR000504 GO:0003723
Acco11g1269 522 MobiDBLite consensus disorder prediction 93 122 - -
Acco11g1269 522 MobiDBLite consensus disorder prediction 76 92 - -
Acco11g1269 522 MobiDBLite consensus disorder prediction 484 522 - -
Acco11g1269 522 SUPERFAMILY RNA-binding domain, RBD 314 413 IPR035979 GO:0003676
Acco11g1269 522 MobiDBLite consensus disorder prediction 430 449 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1269 11 26685767 26689549 Acco11g1269 11 26685767 26689549 ECH