Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1079 ATGGATTTTGATGTGAGAAGACAAGGCAGAGATTTCTCAAGCATGGATTTTTTTAGCTGGTGTTTGAGTTCTTCTTCTTCTTCAACTCCAATCATGTCTTCTCTTGTACACGTCCTCCTCCTCCTTTGTGCTTCTCTGGTTTGTTGTCCTGTCGTATTTTGTTCATATGAAATCAGCAACAACCTCGGATTGGTGAATCAGACTTTTCACCCACACCAAGAGGTCCACAAGTTGAGGACCATAAGAACTCGTCTTCAACGAATCAACAAGCCCCCTGTTAAGATAATTCAGAGTCCTGACGGTGATATCATAGATTGTGTTGTGTCTCATCAACAACCAGCTTTTGATCATCCCATGTTAAGAGGACACAAACCATTGGATCTTCCGGAGAGACCAAAGGGGCATGATAGAAAGGGAATGTTGTTGGATGAGAATTTTCAGTTATGGAGGTTGTCTGGTGAATCATGTCCAGAAGGAACGATTCCGATCAGAAGAACAAGAGAAGAAGATTTGTTGAGAGCAAGCTCTGTTCAAAGATTTGGAAGAAAATTGCCAAAACCTGTTAGAAGAGACACCAACACAAACGGACATGAGCATGCAGTAGGGTATGTGAGTGGAGATGAGTACTATGGAGCAAGAGCAAGCATAAATGTGTGGGCCCCAAGTGTGGCAAATCAATATGAATTTAGTTTGTCTCAAATTTGGGTCATCTCTGGTTCTTTTGGGAATGATCTCAACACCATTGAAGCTGGCTGGCAGGTCAGCCCGGAGCTGTATGGAGACAATTACCCCAGATTCTTTACTTACTGGACGAGTGATGCATATCAAGCAACAGGGTGTTACAATTTACTATGCTCTGGCTTTGTTCAAACCAACAATAAAATCGCAATTGGGGCTGCCATCTCACCAACTTCTTCCTATAATGGTGGACAATTTGACATTAGCTTAGTCATTTGGAAGGATCCAAAGCATGGGAACTGGTGGCTTGAATTCGGATCGGGTATTCTAGTCGGGTACTGGCCATCATTTTTGTTCACACATCTACAGGATCATGCAAGCATGGTACAATTTGGAGGGGAGGTGGTGAATTCGGATCCTTCCGGGTCGCACACTTCGACCCAGATGGGAAGCGGGCATTTCGCCGGCGAGGGGTTCGGAAAAGCCTCATACTTTCGGAACTTGCAAGTTGTGGATTGGGACAACAACTTGATTCCGTTGACGAATCTTCGGGTCTTGGCGGATCACCCGAATTGTTATGATATCCAAGGAGGGATTAATAATGTGTGGGGGAACTATTTTTACTATGGTGGGCCCGGAAAAAATGATAGGTGTCCTTAA 1338 0.4417 MDFDVRRQGRDFSSMDFFSWCLSSSSSSTPIMSSLVHVLLLLCASLVCCPVVFCSYEISNNLGLVNQTFHPHQEVHKLRTIRTRLQRINKPPVKIIQSPDGDIIDCVVSHQQPAFDHPMLRGHKPLDLPERPKGHDRKGMLLDENFQLWRLSGESCPEGTIPIRRTREEDLLRASSVQRFGRKLPKPVRRDTNTNGHEHAVGYVSGDEYYGARASINVWAPSVANQYEFSLSQIWVISGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYNGGQFDISLVIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLQDHASMVQFGGEVVNSDPSGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLIPLTNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGKNDRCP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1079 445 Pfam Neprosin 227 438 IPR004314 -
Acco11g1079 445 FunFam Putative carboxyl-terminal proteinase 218 337 - -
Acco11g1079 445 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 81 441 - -
Acco11g1079 445 Gene3D - 221 335 - -
Acco11g1079 445 Pfam Neprosin activation peptide 96 203 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1079 Acco-ChrAcco11 23403286 23407761 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1079 11 23403286 23407761 Acco12g0635 12 5787150 5791195 CCT
Acco11g1079 11 23403286 23407761 Acco11g1079 11 23403286 23407761 ECH