Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1073 ATGAAGAGAAACACAAGCAATTCTCTGCTCTTTTTCATCTTCTTACTGATTCTTGTCTTCTTGACCTCTTGTATCATTTCTGTCGAAGCAGGGAAGAGTCACAACAGGGAAAGAAAACCTTGTAAACATCATGGACATGGCCATTCTCAAAGTCCTGCCTCATCTCCAGCCCAAACTCAAACCTTCACTTTTGATGTTCTGTCTTTTGGAGCTAAGGCCAATGAGATTTCTGATGATTCCAAGGCGCTTTTAGCAGCATGGGAAGCTGCCTGCAAAGTTGGTGGTACAGTGAAAATTCCAGCAGAACACAGATTCCTAATCAAGCCCATTACTTTACAAGGCCCTTGTATGCCTCACCTTACTCTTCAGATAGATGGGACCCTAATGGCTCCTCCTGCAATATCTTCCTGGCCAAAATCCAGTTTATTTCAATGGATAAATTTCAAAAATATCCACAGCTTCACCGTCCAAGGTTCTGGCACCATCGATGGCCAAGGCTTTAACTGGTGGACCTCCTCACAGATTTATCCTATGCAGAAGAAGGGATATTATTCTGAACAGATTCCAGCAATGAAGCCTACTGCTGTAAGGTTTTATTCTAGCAATGATGTAACAGTTCGTGAGATCAAAATCATAAACAGTCCTCTGTGTCATCTAAAGTTCGACAATTCAAAAGGGATCAAAGTGAATGACATTACAATATCTTCCCCAGAAAATAGCCAGAACACTGATGGTATTCACTTACAGAACTCACATAATGCAGAGATCCATCATTCCAACATTGCAAATGGAGATGACTGTGTTTCCATCCAAACTGGTTGCTCAAATATTCATATTCACCATATTAACTGTGGCCCAGGACATGGTATAAGCATAGGAGGATTAGGAAAAGACAGAAGTGTGGCATGTGTTTCCAACATCATGGTTAACGATGTCTCAATGCAAAACACACTATATGGAGTAAGGATCAAAACATGGCAGGGTGGTGTTGGGATGGTAAAGAATGTGTCGTTCACAAGAGTCCAAGTGGAAGATGTGAAGAGTCCAATAATGGTGGACCAATACTACTGTGACAAGCAAGTGTGCAAGAACCAGACGGGAACAGTGGTGATTTCTGGAGTGAAGTTTGATAAATTTTATGGGACCTATGCATTTCAACCAATACACATAGCTTGTAGCAATTCAATACCTTGCACTGACCTTGATCTGACAGATATTCAGCTTAGGCGATCACAGAAGTACAGTGGTCTTCTTCAACAAGCATTGTGTTGGAACTCTTATGGGAAATCTCAAGGCCCCATGATGCCTTCAAGCATTGATTATTGCTTGAGAAGTGGTGGGGGTTATATCAAGAAGATATCTAGGTCTCATGATAGTGTGTGTTACTAA 1389 0.414 MKRNTSNSLLFFIFLLILVFLTSCIISVEAGKSHNRERKPCKHHGHGHSQSPASSPAQTQTFTFDVLSFGAKANEISDDSKALLAAWEAACKVGGTVKIPAEHRFLIKPITLQGPCMPHLTLQIDGTLMAPPAISSWPKSSLFQWINFKNIHSFTVQGSGTIDGQGFNWWTSSQIYPMQKKGYYSEQIPAMKPTAVRFYSSNDVTVREIKIINSPLCHLKFDNSKGIKVNDITISSPENSQNTDGIHLQNSHNAEIHHSNIANGDDCVSIQTGCSNIHIHHINCGPGHGISIGGLGKDRSVACVSNIMVNDVSMQNTLYGVRIKTWQGGVGMVKNVSFTRVQVEDVKSPIMVDQYYCDKQVCKNQTGTVVISGVKFDKFYGTYAFQPIHIACSNSIPCTDLDLTDIQLRRSQKYSGLLQQALCWNSYGKSQGPMMPSSIDYCLRSGGGYIKKISRSHDSVCY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1073 462 Pfam Glycosyl hydrolases family 28 96 415 IPR000743 GO:0004650|GO:0005975
Acco11g1073 462 PANTHER - 60 429 - -
Acco11g1073 462 MobiDBLite consensus disorder prediction 36 58 - -
Acco11g1073 462 Gene3D - 47 446 IPR012334 -
Acco11g1073 462 SUPERFAMILY Pectin lyase-like 55 439 IPR011050 -
Acco11g1073 462 SMART pbh1 274 294 IPR006626 -
Acco11g1073 462 SMART pbh1 224 250 IPR006626 -
Acco11g1073 462 SMART pbh1 333 354 IPR006626 -
Acco11g1073 462 SMART pbh1 251 272 IPR006626 -
Acco11g1073 462 SMART pbh1 304 325 IPR006626 -
Acco11g1073 462 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1073 Acco-ChrAcco11 23296892 23300736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1073 1 461 Glycoside Hydrolase AT3G26610 60.338 0.0 577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1073 11 23296892 23300736 Acco11g1073 11 23296892 23300736 ECH