Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1059 ATGTTGGGGAGCAACAATGGAAATACTGTTCTTCCTGCTTTCCTGGATGATGCTCACATGCATTACCAAGCTAATGCGGCAAATCAACTTCAGTTGTTTGGAAACTTACCCACCGGGTGTACTGTTGATCCGGTTAATTACTTTGGAAATGAGCATGTAAGTTCTATGGTTCAGCCAAGCAGACAAACCAGGGAAATAGATGACATGTCCAAGCAGCAAAAGCTTCAGATCTCCTTAAATTACAACGTCTGTCAAGATGAACCTGATCGATCAGCAAGCATTCCAAACCCAAACCCAAACCCAAACCCAAATCCCAACCATGTGTCAACAGGATTGAGGTTGTCTTATGATGATGATGAGCGTAACTCATCTGTGACTTCTGCAAGTGGAAGCATGACCATTACACCTCCGATCATATTATCCCTTGGTGACAATATTAGATCTGAGCTTAATAGGCAGAAGCAAGAATTGGATCAGTATGTAAAACTTCAGAAGGAACAATTGTCAAAAGGATTGAGAGACATGAAACAAAAGCACACGGCTTCTCTTCTTACTGCCATTGACAAAGGCGTAAGCAAGAAGCTGAGGGAAAAAGAAGTGGAGATAGAGAACATGAACCGAAAAAACCGTGAACTAGCAGAGAAAATAAAGCAGGTGGCTTTGGAAGCACAAAACTGGCATTACAGAGCAAAGTACAACGAGTCAGTTGTGAATGTTCTAAGGAACAATCTCCAGCAGGCTATCTCGCAGGGAGTTGAACAAGGGAAGGAAGGGTTTGGGGACAGTGAAGTTGATGATGCCGGCTCAACCATTGACCCCAATAACTTGCTGAGCAGCCATGGCGTGATGATGAAATCCACCGGGAAGAAGCAGCAAGGCTCGGACGAACATATGTTTTGCAGGGCGTGCAAGGTGAAGGAGGTTTCGATGTTGTTAATGCCTTGTAGGCACTTGTGCTTGTGTATGGACTGTGATGCTTTTCTCAATGTTTGCCCTGTATGCCAAATGATGAAATCTGCTAGTGTCCAAGTGTTTCTTTCTTAA 1044 0.4377 MLGSNNGNTVLPAFLDDAHMHYQANAANQLQLFGNLPTGCTVDPVNYFGNEHVSSMVQPSRQTREIDDMSKQQKLQISLNYNVCQDEPDRSASIPNPNPNPNPNPNHVSTGLRLSYDDDERNSSVTSASGSMTITPPIILSLGDNIRSELNRQKQELDQYVKLQKEQLSKGLRDMKQKHTASLLTAIDKGVSKKLREKEVEIENMNRKNRELAEKIKQVALEAQNWHYRAKYNESVVNVLRNNLQQAISQGVEQGKEGFGDSEVDDAGSTIDPNNLLSSHGVMMKSTGKKQQGSDEHMFCRACKVKEVSMLLMPCRHLCLCMDCDAFLNVCPVCQMMKSASVQVFLS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1059 347 Coils Coil 195 222 - -
Acco11g1059 347 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 281 346 - -
Acco11g1059 347 CDD mRING-HC-C3HC5_CGRF1-like 299 334 - -
Acco11g1059 347 Coils Coil 147 167 - -
Acco11g1059 347 ProSiteProfiles Zinc finger RING-type profile. 300 335 IPR001841 -
Acco11g1059 347 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 64 344 IPR017066 -
Acco11g1059 347 MobiDBLite consensus disorder prediction 86 130 - -
Acco11g1059 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 347 IPR013083 -
Acco11g1059 347 Pfam Zinc finger, C3HC4 type (RING finger) 298 336 - -
Acco11g1059 347 PIRSF SBP1_RNase_bind 1 347 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1059 Acco-ChrAcco11 23003546 23009596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g1059 299 347 Miscellaneous Gene Families AT4G39050 34.694 2.26e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1059 11 23003546 23009596 Acco11g1059 11 23003546 23009596 ECH