Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g1025 ATGAGCAGCCTTGCCTGTTTATGTGCGGTTTGCGCCATCAGCACGGTACTTCGCAGTGCTTACCTAATTCAAGAATTGCATTTTGTTTTATCGTTCGTGATTTTCTCTCAATTCACACTTTGCCGTAATCAGCTTCTTCATCATCAGGAGGAATTGCGATCTAAATCATGCGAATGGAGTCAGTTGAAGAGTGTAAGTGATGTTAAGAAAATTCAATCTGTATATGTGCAATGCAGCATAATGAACTCTGATGAAAAAGCAGCTGGGATTTTATCTTCCAAAATTGTTGATTCAAGGAGTAGTGGGTGTCAGCTGGAAACTTGTAGTCCTGTTTCTATGAAGCAACCTAACCAATACTCCACAGTTCGTAAAGTTACTCAGTGTTCACCTTCTCCTGTACTTTCTTTAGTGGAGAGAGAACGTCAAGATACAGACACTTCTCATGTAACACCTGTTGATTCAGACCATGAATTCCCAAAGTTAGGAAATGAGTCAACTTCATCGAACACCATGCGAGATGTACATATTTCAATGAGGTTGATGGAGGAGTTTCTTGAGCTTGCTAAAGAAAATACAGAGAAGGATCTGGAAACATGTGGTATACTAGGTGCATTCCTTGCTAAGGGAACCCTCTACATGACCACTCTGATTATACCAAAACAGGAATCAACATCCAGTTCTTGTCAGGCTACGCATGAGGAGGAAGTTTTTGCAATTCTAAATGAAAGATCCCTTTTGCCTGTGGGATGGATCCATACCCATCCTTCTCAGAATTGTTTCATGTCATCAGTGGATCTGCACACTCAATATTCTTATCAGGTAATGGTTCCTGAGGCTTTTGCCATTGTACTGGCTCCTACAGATACCTCAAGGAGCTGTGGATTGTTTCGGATAACTGACCCTGATGGAATGAGTATTCTACAAGGCTGCCCAGAGACAGGATTTCATCCACACACAGACCCAGATAATGGGAGTCCCATGTATGAGCAATGCGCCAATGTCTACAAGAACTCCAATCTGAGGTTTGAAATCTTTGACTTGCGCTGA 1047 0.4193 MSSLACLCAVCAISTVLRSAYLIQELHFVLSFVIFSQFTLCRNQLLHHQEELRSKSCEWSQLKSVSDVKKIQSVYVQCSIMNSDEKAAGILSSKIVDSRSSGCQLETCSPVSMKQPNQYSTVRKVTQCSPSPVLSLVERERQDTDTSHVTPVDSDHEFPKLGNESTSSNTMRDVHISMRLMEEFLELAKENTEKDLETCGILGAFLAKGTLYMTTLIIPKQESTSSSCQATHEEEVFAILNERSLLPVGWIHTHPSQNCFMSSVDLHTQYSYQVMVPEAFAIVLAPTDTSRSCGLFRITDPDGMSILQGCPETGFHPHTDPDNGSPMYEQCANVYKNSNLRFEIFDLR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g1025 348 ProSiteProfiles MPN domain profile. 174 304 IPR037518 -
Acco11g1025 348 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 170 277 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco11g1025 348 MobiDBLite consensus disorder prediction 140 160 - -
Acco11g1025 348 SUPERFAMILY JAB1/MPN domain 174 302 - -
Acco11g1025 348 PANTHER AMSH-LIKE PROTEASE 48 348 - -
Acco11g1025 348 CDD MPN_AMSH_like 172 348 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Acco11g1025 348 Gene3D Cytidine Deaminase, domain 2 152 348 - -
Acco11g1025 348 SMART pad1_6 173 301 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco11g1025 348 FunFam AMSH-like ubiquitin thioesterase 2 154 348 - -
Acco11g1025 348 MobiDBLite consensus disorder prediction 140 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g1025 Acco-ChrAcco11 22426581 22431530 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g1025 11 22426581 22431530 Acco11g1025 11 22426581 22431530 ECH