Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0982 ATGGATCAATGGAGAGGAAGAAGATGGATGAAATGGGGGAGTGATGGAGGATTTGCACTTTTGAGTTTTTATTTCACTAGGTCTCTCACTCTCAACAATTTTCGTCTTGATGTCAGAAGTGCCAAATCCACTCATGGTGGCTGTGCTATGTGCTATGCGATACTAGATCGCTTCCGCCGTTACGCTTCTTCGTCTTCTGCATTTTCTCCTTCTCTGCTTCGTAAAGCTTTACCATTTGCTACCTTTTTTTCCTTCTCCTCCGTATCTCAATCCACATTTCAAGCATCAGCAGCCATGGTGGCTCATGCTAAAGACGAAGCCTATCTCAACACCGTCATCCCCAGGCGTATCCAACTCTTCGAGTCCATCAAAGCTCAGCAACTAGCTCATCGCCAATCCCTCCCCGCTGATCCCATCGAGATAACTTTGCCGGATAAGAATGTCAAGGAAGGGAAGAGGTGGGTGACTTCACCCATTGATATTGCCAGAGAGATTTCAAAGAATTTTGCTGCAAACGCTTTGATCGCCAAAGTCAATGGGGTCCTATGGGATATGACAAGGCCCTTGGAAGGTGACTGTGAGCTTCAGATTTTCAGTTTTAAAGACGATGAAGGACGTGACACTTTTTGGCATTCCAGTGCTCACATTTTGGGGCAGGCCCTTGAGACGGAGTATGGATGTAAGCTCTGCATTGGGCCCTGCACCACTAGAGGAGAGGGATTCTATTATGATGCCTTTTATGGTGACTTGAGTTTGAATGATGATCACTTCAAGCAGATAGAGTCTGTGGCTTCGAAGGCTGTTAAGGATAATCAACCATTTGAACGTATTGAAGTATCTAGGGAGCAGGCACTCGAAATGTTTTCTGATAATAAGTTTAAGGTTGAAATTATCAATGATTTGCCTGCCGACAAAACCATTACTGTATACAGATGTGGTCCCTTGGTTGATCTTTGTCGTGGTCCACATATACCTAGCACATCCTTTGTCAAGGCACTTGCTTGTTTAAAGGCTTCCTCAGCATATTGGAGAGGGGACAAAGACCGTGAAAGTTTACAAAGAGTTTATGGGATATCTTTTCCTGATCAGAAGAGTTTGAAGGAATATATCTACCGGTTGGAGGAAGCTAAAAAATATGACCACAGATTGTTGGGTGTAAAACAGGAACTTATTCTTCATCATGAGTGGAGCCCAGGAAGTTGGTTTTTTCTTCCTCATGGCACACGGATTTACAACAAACTGATGGAATTTATTCGAAATCAATATAGAGAAAGAGGTTACCAAGAGGTCATATCTCCTAATGTATATAATATGGAGCTGTGGGAGCAATCTGGACATGCTGCAAACTACAAGGAGAATATGTTTGTCTTTGAGATTGAAAAGCAGGAGTTTGGGTTGAAGCCAATGAATTGTCCAGGTCACTGCTTGATGTTTAAGCACAGAGTTCGCTCATACAGAGAACTTCCTCTTCGACTGGCTGATTTTGGTGTTTTGCATCGGAATGAGGCTAGTGGCGCCCTAAGTGGATTGACTCGTGTTAGGAGATTTCAGCAGGATGATGCCCATATCTTCTGCAGGGACTCCCAGGTAAAGGAGGAAGTAAGAGGTGCGTTGGATTTTATCAATTATGTCTACAACATATTTGGCTTCACCTATGATCTGAAGCTTTCCACGAGGCCGGAGAAATACCTTGGAGATTTATCAACGTGGGAGAAAGCTGAAACTGCGCTTAAAGAAGCTTTAAATGAGTTTGGGAAGCCTTGGCAGATAAATGAAGGGGATGGTGCATTCTACGGACCAAAGATAGATATCAGCGTGTCTGATGCGTTGAACAGGAAATTTCAGTGTGCAACTTTGCAGCTTGACTTCCAGCTTCCTGATCGTTTTAAGTTGGAATACTCAGCTGAGGATGAAGCCAAAATTGAAAGACCTGTGATGATACACAGAGCCATTCTAGGATCTGTTGAGCGCATGTTTGCTATATTATTGGAGCATTACAAGGGTAAATGGCCCTTCTGGCTCAGTCCTCGTCAAGCGATTCTTTGCCCTGTGTCAGAGAAATCACAGTCTTACGCTATTGAGGTGCGAGATCAGATTCATCAAGCAGGTTATCATGTTGACGCTGATACAACTGATAGGAAGATTCAGAAGAAGGTGCGTGAAGCTCAGTTAGCACAGTACAACTACATACTGGTGGTTGGAGAGGAGGAAGCTAAGACCGGACAGGTAAGTGTACGTGTTAGAGATAACTCAGATCACAAGGTTATGAGTATTGAGAACCTACTCAAACTCTTCAGTGATGAAGTTGCAGCCTTCCATTGA 2322 0.4367 MDQWRGRRWMKWGSDGGFALLSFYFTRSLTLNNFRLDVRSAKSTHGGCAMCYAILDRFRRYASSSSAFSPSLLRKALPFATFFSFSSVSQSTFQASAAMVAHAKDEAYLNTVIPRRIQLFESIKAQQLAHRQSLPADPIEITLPDKNVKEGKRWVTSPIDIAREISKNFAANALIAKVNGVLWDMTRPLEGDCELQIFSFKDDEGRDTFWHSSAHILGQALETEYGCKLCIGPCTTRGEGFYYDAFYGDLSLNDDHFKQIESVASKAVKDNQPFERIEVSREQALEMFSDNKFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPSTSFVKALACLKASSAYWRGDKDRESLQRVYGISFPDQKSLKEYIYRLEEAKKYDHRLLGVKQELILHHEWSPGSWFFLPHGTRIYNKLMEFIRNQYRERGYQEVISPNVYNMELWEQSGHAANYKENMFVFEIEKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCRDSQVKEEVRGALDFINYVYNIFGFTYDLKLSTRPEKYLGDLSTWEKAETALKEALNEFGKPWQINEGDGAFYGPKIDISVSDALNRKFQCATLQLDFQLPDRFKLEYSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAILCPVSEKSQSYAIEVRDQIHQAGYHVDADTTDRKIQKKVREAQLAQYNYILVVGEEEAKTGQVSVRVRDNSDHKVMSIENLLKLFSDEVAAFH 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0982 773 CDD ThrRS_core 380 676 IPR033728 -
Acco11g0982 773 ProSiteProfiles TGS domain profile. 137 199 IPR004095 -
Acco11g0982 773 FunFam Threonine--tRNA ligase, cytoplasmic 137 198 - -
Acco11g0982 773 Gene3D Bira Bifunctional Protein; Domain 2 360 668 IPR045864 -
Acco11g0982 773 Gene3D - 202 359 - -
Acco11g0982 773 NCBIfam threonine--tRNA ligase 210 765 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 CDD TGS_ThrRS 139 204 - -
Acco11g0982 773 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 405 671 IPR006195 -
Acco11g0982 773 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 307 356 IPR012947 GO:0004812|GO:0005524|GO:0043039
Acco11g0982 773 Pfam Anticodon binding domain 678 766 IPR004154 -
Acco11g0982 773 PANTHER THREONINE-TRNA LIGASE 110 772 - -
Acco11g0982 773 CDD ThrRS_anticodon 676 765 IPR047246 -
Acco11g0982 773 SMART tRNA_SAD_4 307 356 IPR012947 GO:0004812|GO:0005524|GO:0043039
Acco11g0982 773 Gene3D - 669 772 IPR036621 -
Acco11g0982 773 PRINTS Threonyl-tRNA synthetase signature 499 522 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 PRINTS Threonyl-tRNA synthetase signature 466 494 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 PRINTS Threonyl-tRNA synthetase signature 644 657 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 PRINTS Threonyl-tRNA synthetase signature 671 683 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 PRINTS Threonyl-tRNA synthetase signature 600 628 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 457 666 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Acco11g0982 773 SUPERFAMILY ThrRS/AlaRS common domain 201 378 IPR018163 GO:0000166
Acco11g0982 773 SUPERFAMILY Class II aaRS ABD-related 664 769 - -
Acco11g0982 773 FunFam Threonine--tRNA ligase mitochondrial 1 670 773 - -
Acco11g0982 773 FunFam Threonyl-tRNA synthetase, mitochondrial 203 360 - -
Acco11g0982 773 FunFam Threonine--tRNA ligase 2, cytoplasmic 362 669 - -
Acco11g0982 773 SUPERFAMILY TGS-like 139 199 IPR012676 -
Acco11g0982 773 Pfam TGS domain 139 198 IPR004095 -
Acco11g0982 773 SUPERFAMILY Class II aaRS and biotin synthetases 380 663 IPR045864 -
Acco11g0982 773 Hamap Threonine--tRNA ligase [thrS]. 204 771 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Acco11g0982 773 Gene3D - 137 199 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0982 Acco-ChrAcco11 21699597 21712700 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0982 11 21699597 21712700 Acco11g0982 11 21699597 21712700 ECH