Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0394 ATGATGGACTCTTCTCTGTCATCCACCTCCTCCGATTCCGGTTGTGTCAACACCTCCGATCAGAATGCTGGGCGGAGTCGGAGAAGTGGGGGCGTTAGTGAAGTCGTGATCGTGCAGCAGCAAACACGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTTTGATTCATTTGATTGGCATGGGGTTCCTTCTGGGGCTTCTCGGCTTCAATAGGTTTGAGAAGGAGAATAGACTTAATATTGATAGGTATACTGCCCAGTTTTCGGAGAATAAAAACGGTTTGACCGAGGATTTATGGCCTCTCTATGCTGTTGCCGGTGGAGTTGGGTCTGTTCTTGGATGGAGTTGGTTGTTGTTGTTGGGTTCTCGAGGCAGTCAAATGATGAAGGTCTCGGTCCACATCCTCACCACTTATCTTGCAGTGATCAGCGTTTTGTGTTTCTGGGCTGACCAGTTTTTCTGGGGAGTCTTTTTTGCCATTGGGGCTGCTTTGCAGTTCTTGTACGTCATATCAGTCATAGACAGGCTTCCCTTTACCATGTTGGTTCTACAGAAGGCTGGGAAGATGGTATGCAGTCTTCCTGAAGTTATGAGATTGGCATATGCATTTATGCTTGTTCTGCTTTTATGGATGGCGTTATGGTCTTTTGGAGCAGCTGGTGTCGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACTGGTGCAGTACTTTGTAATACAGTGCATGTTATTGTGTCTGGGATGGTGTTTCTTGTTCTTATTCATGGTGGCAGAGAGGCAGCATCAATGCCAGCTAACTCCTTATTGAAATCTCTTAAGTATGCCTTAACTACATCTTTTGGCAGCATTTGTTATGGCTCATTATTTACAGCTGCTATTAGGACACTTCGTTGGAAGATAAGGGGATTCCGGTCAAAGATTGGAAAGAACGAGTGCTTGCTTTGCTGTGTTGATTTCCTTTTTCATCTTGTGGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCTGATTGCTGTTAATGGTAAAAATTTTAACCATTCGGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGAGTTGAAGCACTCGTGGCCTATGATTGTTCAGGAGCTGTCCTGCTAATGGGCATCATTTTTAGCGGGCTTATTACTGGAACTTGCTCAGGTGTCTGGGCATGGTATAAATGGAGTGACAGAGTACTTATGATTGGGTCCACGTCTATGCTGATGGGTATGGTCTTGGTGGGAGTGGCAATGGTAGTGGTGGAAAGTGCTGTTACATCCTTTTATATCTGCTATGCAGAAGACCCCTTATTAATTCGTAGATGGGACACTGAATTTTTCAACCAGATGTCCGAGATGCTGCATCAGCGGCTTCAACACCGGAGTTCACGAACTAGTGAGGTTAGAGTGTTAAATCGGCTTGATGGGCTGGTTCAAGAAAATGCTTCAATTTGA 1503 0.4511 MMDSSLSSTSSDSGCVNTSDQNAGRSRRSGGVSEVVIVQQQTRRWHDVFWLGIFLIHLIGMGFLLGLLGFNRFEKENRLNIDRYTAQFSENKNGLTEDLWPLYAVAGGVGSVLGWSWLLLLGSRGSQMMKVSVHILTTYLAVISVLCFWADQFFWGVFFAIGAALQFLYVISVIDRLPFTMLVLQKAGKMVCSLPEVMRLAYAFMLVLLLWMALWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANSLLKSLKYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVLIAVNGKNFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGIIFSGLITGTCSGVWAWYKWSDRVLMIGSTSMLMGMVLVGVAMVVVESAVTSFYICYAEDPLLIRRWDTEFFNQMSEMLHQRLQHRSSRTSEVRVLNRLDGLVQENASI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0394 500 MobiDBLite consensus disorder prediction 1 27 - -
Acco11g0394 500 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 39 480 IPR007603 GO:0022857|GO:0055085
Acco11g0394 500 Pfam Plasma-membrane choline transporter 157 452 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0394 Acco-ChrAcco11 5666202 5670669 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0394 11 5666202 5670669 Acco11g0394 11 5666202 5670669 ECH