LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco11g0376	ATGGCTTCTCATTTAACTTCTCGTAGTCTCTCTTTCTTCCTTCTTATTGCTCTCACATGTGGAGTAGGAGCAGCTACTTCTTCTTCCAACGGCACCAAAATAGGCCAAGGCTATCGCCTAATCTCCATTGAAGAGACCTCTGATGGTGGCCTCATAGGTCACCTTCAAGTTAATAAGAAGAACAAAATCTACGGTCCTGATATCCAACTCTTGCAGCTCTATGTCAAGCACGAGACAGATAATCGTTTGAGGGTACACATAACCGATGCGGAGAAGCAGAGATGGGAAGTGCCGTACAATCTGTTGCCCAGGGAGCAACCTCCAGCTCTGAAGCAGACGATTGGAAGGTCAAGGAAGAATCCTATCACAGTTTCAGAGTACGCAGGTTCTGAGCTTATTTTCAGCTACACTGCAGATCCATTCAGCTTCGCAGTGAAGAGAAAGTCGAATGGACAGGTTCTCTTCGATTCAAGCTGGGATGACACAGACGCTTTTGGCCCAATGGTGTTCAAGGATCAGTACCTTGAGATTTCAACCAAATTGCCCAAAGATGCGTCGTTGTATGGCTTGGGCGAGAACACTCAGCCACACGGGATCAAACTTTACCCGAGCGATCCATACACTTTGTACACAACTGATATTTCAGCCATTAATCTCAATGCTGATCTGTATGGATCGCACCCAGTGTACATGGATCTTAGAAATGTCGGTGGTGAGCCTTTTGCACACGCTGTTCTGTTGCTGAATAGCAATGGGATGGATGTATTTTACCGGGGAACTTCTCTGACGTACAAGGTTATTGGAGGTGTTTTCGATTTTTACTTCTTTGCTGGCCCTACTCCTCTGAATGTTGTTGATCAGTACACTTCCTTAATTGGAAGACCAGCTCCGATGCCTTACTGGTCATTTGGATTCCACCAATGCAGATGGGGTTACCATAACCTGTCCGTTATAGAAGAAGTTGTTGATAGTTACAACAAGGCTCAAATCCCACTCGATGTGATCTGGAATGACGATGATCATATGGATGGGAAAAAGGACTTCACAGTTAACCCCGTCAACTACCCTCGTCCAAAGCTTTTAGCCTTCCTAGACAAAATACACCGCATTGGTATGCATTACATTGTCATTATCGATCCAGGAATTGCTGTCAATGCCAGTTATGGTGTCTACCAGAGGGGCATGGCTAACGATGTTTTTATCAAGTATGATGGTGATCCCTTCATGGCCCAAGTTTGGCCAGGGGCAGTATATTTTCCTGATTTTCTTAATCCCAAAACGGTCTCTTGGTGGGGTGATGAGATCCACCGATTCCATGAACTCCTTCCAGTTGATGGCCTATGGATTGACATGAATGAAGTTTCAAACTTCTGTTCAGGAAAGTGCACAATTCCCAAGGGCAAGCAGTGCCCCACTGGAACAGGACCTGGATGGATCTGTTGCCTGGATTGCAAAAACATTACCAAGACAAGATGGGATGACCCACCCTACAAGATAAACGCTTCAGGAATCCAAGCTCCGATAGGCTACAAAACCATAGCTACAAGTGCAGTCCACTACAATGGTGTTTTGGAGTATGATGCTCACAGTATTTATGGCTTCTCCCAAACAGTTGCTACACACAAGGGGCTTCAAGGGATTCAGGGAAAACGACCTTTTATCCTGTCCCGGTCCACTTATGTCGGTTCAGGCAAATATGCTGCTCATTGGACTGGTGACAACAAGGGCACATGGGAGGACTTGAGGTACTCCATATCTACAATGCTCAATTTTGGCATCTTTGGGGTTCCAATGGTTGGTTCAGATATCTGCGGCTTCTATCCAGCGCCAACCGAAGAGCTCTGCAACCGGTGGATCGAAGTTGGTGCTTTCTACCCATTCTCAAGGGACCATGCAAATTACTACTCCCCAAGACAAGAGCTTTACCAATGGGAATCAGTTGCTGAGTCTGCTCGCAACGCCTTGGGTATAAGATATAAGCTCCTCCCTTACCTCTACACACTGAACTATGAGGCTCATATAAGTGGAGCCCCAATAGCCAGGCCTCTGTTCTTCTCATTTCCAAGCTACACTGCATGTTATGGCACTAGCACCCAGTTTTTGCTAGGGAAAGGTCTCATGATCTCTCCGGTGCTGGAGCAGGGAAAAACACAAGTGAATGCCCTCTTCCCTCCTGGCACCTGGTACAGCTTGCCCAACCCGACATCATTCATTACATCAAAGAATGGAGTCAATGTCAACCTCGATGCGCCGCTGCATGTGGTCAATGTCCATCTGTATCAGAACATCATTCTCCCTCTGCAACGAGGAGGATTGCTTTCCAAGCAAGCAAGAATGACACCATTCACGCTCATGGTGACCTTCCCTTCTGGTGCAACCGAAGGAGAAGCTCAAGGTAACCTTTACCTTGATGATGATGAACTGCCAGAAATGAAGCTTGGAAGTGGCTCTTCAACGTACGTTGATTTCTATGCGAGTTTGAAACAGGGAAGTATCAAGATTTGGTCACAAGTTCAAGAGGGCAAGTTTGCTTTAGACAAAGGCTGGATTATTGAGAAGATATCTGTGTTGGGATTAGAAGGAAATGCTGCACCGTCGTCACTTGAACTTGATGGTGTACCTTTGGTGGGAGGATCTGATATGGAGGTTCGTACGTCAGATCAGAAGTATTCGCCGGAGAGACAAGAAGATTATGAGCAGAAGGCAACAATGGTGGACGTGAGTGGCTTGAAAATCCCTGTGGGCAAAAATTTTGCAATGACCTGGAAAATGGGGGTTTCTCGTTAG	2787	0.4625	MASHLTSRSLSFFLLIALTCGVGAATSSSNGTKIGQGYRLISIEETSDGGLIGHLQVNKKNKIYGPDIQLLQLYVKHETDNRLRVHITDAEKQRWEVPYNLLPREQPPALKQTIGRSRKNPITVSEYAGSELIFSYTADPFSFAVKRKSNGQVLFDSSWDDTDAFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPSDPYTLYTTDISAINLNADLYGSHPVYMDLRNVGGEPFAHAVLLLNSNGMDVFYRGTSLTYKVIGGVFDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWSFGFHQCRWGYHNLSVIEEVVDSYNKAQIPLDVIWNDDDHMDGKKDFTVNPVNYPRPKLLAFLDKIHRIGMHYIVIIDPGIAVNASYGVYQRGMANDVFIKYDGDPFMAQVWPGAVYFPDFLNPKTVSWWGDEIHRFHELLPVDGLWIDMNEVSNFCSGKCTIPKGKQCPTGTGPGWICCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSAVHYNGVLEYDAHSIYGFSQTVATHKGLQGIQGKRPFILSRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGIRYKLLPYLYTLNYEAHISGAPIARPLFFSFPSYTACYGTSTQFLLGKGLMISPVLEQGKTQVNALFPPGTWYSLPNPTSFITSKNGVNVNLDAPLHVVNVHLYQNIILPLQRGGLLSKQARMTPFTLMVTFPSGATEGEAQGNLYLDDDELPEMKLGSGSSTYVDFYASLKQGSIKIWSQVQEGKFALDKGWIIEKISVLGLEGNAAPSSLELDGVPLVGGSDMEVRTSDQKYSPERQEDYEQKATMVDVSGLKIPVGKNFAMTWKMGVSR	928

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco11g0376	928	FunFam	Alpha-glucosidase 1	661	761	-	-
	Acco11g0376	928	FunFam	Alpha-glucosidase 1	31	294	-	-
	Acco11g0376	928	Pfam	Glycosyl hydrolases family 31	274	764	IPR000322	GO:0004553\|GO:0005975
	Acco11g0376	928	Gene3D	glycosyl hydrolase (family 31)	31	294	-	-
	Acco11g0376	928	Pfam	N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase	51	183	IPR031727	-
	Acco11g0376	928	SUPERFAMILY	Glycosyl hydrolase domain	678	758	-	-
	Acco11g0376	928	ProSitePatterns	Glycosyl hydrolases family 31 active site.	446	453	IPR030458	-
	Acco11g0376	928	SUPERFAMILY	Galactose mutarotase-like	33	281	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Acco11g0376	928	PANTHER	ALPHA-GLUCOSIDASE	56	895	-	-
	Acco11g0376	928	FunFam	Maltase-glucoamylase, intestinal	295	660	-	-
	Acco11g0376	928	Gene3D	Glycosidases	295	660	-	-
	Acco11g0376	928	CDD	GH31_MGAM_SI_GAA	293	673	-	-
	Acco11g0376	928	Gene3D	-	763	927	IPR013780	-
	Acco11g0376	928	Pfam	Galactose mutarotase-like	185	253	IPR025887	-
	Acco11g0376	928	CDD	GH31_N	175	293	-	-
	Acco11g0376	928	Gene3D	-	661	760	IPR013780	-
	Acco11g0376	928	SUPERFAMILY	(Trans)glycosidases	284	676	IPR017853	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco11g0376	Acco-ChrAcco11	5374919	5379222	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco11g0376	34	927	Glycoside Hydrolase	AT1G68560	75.280	0.0	1458

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Acco11g0376	11	5374919	5379222	Acco11g0376	11	5374919	5379222	ECH