Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0283 ATGGCGACATCGTCGTCTACTGCGGCCTCCGCCAACATCATGCTTGCCATCTTCGAGAAGAAGACCAACTCAATCGATCTTTATCGGCCTCTTCGCAACTACGTCGCTTTCCACTACTCCGAACGCGAGGCTCAGCACATCGAAGATGACCTCCAAACCCTTAAGCAACTCCGTTCCGACCTCGAGCGCCACTCTGACCCTTCCCTTACCGCTCGCCGCGACCTTCTTCAATCCTACTACAGAGCTCTCTGCCTTGTGGAGACCCGTTTCCCCATATCTTCTGATCCAGATCACGTCAATACTGTCAGCTTCGTGTGGTTCGATGCGTTTAAGCCCAAATTGAAGGCAACCCAGCAGAATATTCATCTTGAGAAAGCCGCGGTGTTGTTCAATTTGGGCGCAGTTTATAGTCAAATTGGGTTATCCTATGATCGGAATACTGTTGACGGCCGGAGGCAGGCCTCACATGCGTTTATTGCAGCTGCTGGGTCGTTTGCTTACTTGAGGGATAATGCGGCCATGAAGGCGTCAATTGGGAGTTCCACAACTGTGGATTTGTCTGTTGAGTGCTCAGGAATGTTGGAGAGGTTGATGTTGGCTCAAGCACAAGAGTGCGTGTTTGAGAATACCATTGCAAAAGGAAGCACCCCGGGGGTTTGTGCGAAGATCTCTAGGCAGGTTGGGCTATACTATGAAGAAGCTTTAGCTGCATTGAACGTTGCACCTCTAAATCCGCATTTTGACAAGTCTTGGTTAGCTCATGTACAGCTAAAGGCTACTTTATTCTTTGGAGAAGCTTGCTATAGATATGGATTAGAGCTACATGAGAAAGAAGAGATAGCAGAGGAGATTGCAAGACTAAAGACTGGGGTTAATGCACTAACTGAAGCAAAGAAAAGCTCAAAGGGTGCCCCTGCACAAATCCTAGATGCAATTAGTAAGTTAGAAGCCAATCTTAACCGAAACCTTGAAAGGGCTGTTAAAGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCTCCCAGTTCCTTAGCACCTCTTCCTGCTTTTTCTATGGTGAAGCCAATGTCAATGAGTGAAGTGTTGGATGCAAGTAAAGAGAAAATGTTTGCAAGTCTTGTTCCTGACAGCAGTGCAAAATCACTCTCCAGATACACTGAGATGGTTGATGACATTATAAGATCCCAGGCTGAAAAATTGCAACGAGCCAGTGAGTTAACCCGAATAAGGCTAAAGGAAATGGAGCTGCCTGATTCTATTCTTGCTTTGGAAGGAAATTTAACTCTACCTGCACATCTCAAAGAAGATGTGGAGGCCGTGCAGATCAGTGGAGGTCCTGCTGGTTTGGAAGCAGAGTTACAGCAACTTAAGGATCTAAGGAGGGTGAATCAAGAAATGTTGGTCCAGACAGAGGAGCTGTTGCAGAAGGAGGCAAGAGAAGATGCCCAATTTAGAGGCCAATTTGGGACAAAGTGGACTAGGCCTCAATCAAGCACTTTAACAAAAAACTTGCAGGATAGATTGAATAGATTTGCAGGTAACTTGAAGCAAGCTGGAGAAAGTGATGGCCGGATTGAGCGCTCAGTTAGAGAACACGCTGCACTTATGTCTATCCTTGACAGCCGTCCGATTGAATCTGCACTCCCTTCCTTAGCAAGGCCGATAATGTCTCTAGATGCCAATGAAGATGCTATTGTAGGATCCCTCAAGCAGAGCTTGAGGCAACTTGAAACTCTGGGAGCTCAGAGGGCTGGCCTTGAAGATATGCTTAAAGAGATGAGAAGAAAGGATGATATACTACCCAAGTTGATGACGTCAACAGGTTCTCATGAGGATCTTTTCAAGAAAGAGATAACAAAATATGACCATATAAGTGAAGAAATAGCTCAAAACATCAATGCACAAGAGCAGTTGTTGCTGCAGATTCAGGATCAAAATGATGCGTTCTCTGCTATCTTTAATCTTGAAGATTACAAAGCTTCGCGTGAAAAATGCTACAAGCAGATTGAAGCTGCCATAGTAAAGTATAGAGAAATTAAAGACAACATCAATGAAGGGTTGAAATTTTATGTTACGCTGCAGGATGCAATCACAAATGTAAAGCAGCAGTGCAGTGACTTCATAATGACCAGAAACATCCAGTGCAGGGAAATGATTGAAGATGTCCAGAGACAAGTGGCTGGTCTCAGTTTCCAGGATAACAAAACCACTGCCCCCTCTAACAGTAGCTACCCTTCAATGGGACACCAGTCTCAAAGATCCTATCCACCAGATTCTCGCCCCCAAACCGGATATTATCAGCCGCCGCCGCCAGACCAGCCATCAGCAACTGGGTATGGTCAACCCCCTCCATATGGTGGTTCTGCACATCAGCCACCTCCGCCGTACCACATGCCACACCCATCAGCTAGTCCATATCCTCAGCAGCAACCAGCAGGCCATGACTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCGTACTATAATGCACATTCTCAGCAACCTTCCTCGGTTCCTCGGCCTCCTTATACTATTCCAGGTCCATACCCCCCTGGCTTCTATAAGCAACAATAG 2577 0.4629 MATSSSTAASANIMLAIFEKKTNSIDLYRPLRNYVAFHYSEREAQHIEDDLQTLKQLRSDLERHSDPSLTARRDLLQSYYRALCLVETRFPISSDPDHVNTVSFVWFDAFKPKLKATQQNIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAYLRDNAAMKASIGSSTTVDLSVECSGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALNVAPLNPHFDKSWLAHVQLKATLFFGEACYRYGLELHEKEEIAEEIARLKTGVNALTEAKKSSKGAPAQILDAISKLEANLNRNLERAVKENDRVYLMRVPSPSSLAPLPAFSMVKPMSMSEVLDASKEKMFASLVPDSSAKSLSRYTEMVDDIIRSQAEKLQRASELTRIRLKEMELPDSILALEGNLTLPAHLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQEMLVQTEELLQKEAREDAQFRGQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAGESDGRIERSVREHAALMSILDSRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMRRKDDILPKLMTSTGSHEDLFKKEITKYDHISEEIAQNINAQEQLLLQIQDQNDAFSAIFNLEDYKASREKCYKQIEAAIVKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFIMTRNIQCREMIEDVQRQVAGLSFQDNKTTAPSNSSYPSMGHQSQRSYPPDSRPQTGYYQPPPPDQPSATGYGQPPPYGGSAHQPPPPYHMPHPSASPYPQQQPAGHDYGQPAYPGWRGPYYNAHSQQPSSVPRPPYTIPGPYPPGFYKQQ 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0283 858 ProSiteProfiles BRO1 domain profile. 12 407 IPR004328 -
Acco11g0283 858 Pfam ALIX V-shaped domain binding to HIV 429 713 IPR025304 GO:0005515
Acco11g0283 858 Coils Coil 576 596 - -
Acco11g0283 858 SMART BRO1_2 13 397 IPR004328 -
Acco11g0283 858 MobiDBLite consensus disorder prediction 762 778 - -
Acco11g0283 858 Coils Coil 449 476 - -
Acco11g0283 858 Pfam BRO1-like domain 14 392 IPR004328 -
Acco11g0283 858 MobiDBLite consensus disorder prediction 730 761 - -
Acco11g0283 858 Coils Coil 44 64 - -
Acco11g0283 858 Coils Coil 309 332 - -
Acco11g0283 858 CDD V_Alix_like_1 375 711 - -
Acco11g0283 858 Gene3D alix/aip1 in complex with the ypdl late domain 375 653 - -
Acco11g0283 858 CDD BRO1_Alix_like_1 14 369 - -
Acco11g0283 858 Coils Coil 277 297 - -
Acco11g0283 858 PANTHER PCD6 INTERACTING PROTEIN-RELATED 11 852 - -
Acco11g0283 858 Gene3D alix/aip1 like domains 421 702 - -
Acco11g0283 858 MobiDBLite consensus disorder prediction 730 858 - -
Acco11g0283 858 Gene3D alix/aip1 like domains 8 374 IPR038499 -
Acco11g0283 858 MobiDBLite consensus disorder prediction 786 806 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0283 11 3982389 3990525 Acco11g0283 11 3982389 3990525 ECH