Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0272 ATGGCTATTCCTTATCCCCATTTCATTTCGTCGGAGAAAGCAGCCATGGAGGCGGGTCTTTTGGTGCCTTCATCACCATCGTCGTCTCTATCTCCTCCCGTGATCCTGACGCAGGACGATTTGAAGAAAATCGCCGCCTACAAAGCCGTGGAGTACGTTGAATCCGGCATGGTTCTGGGTTTGGGAACCGGCTCGACGGCCAAGCACGCGGTGGACAGAATCGGCGACCTTTTGCGGCAAGGCAAGCTCAAGAATATTATAGGAATACCCACGTCGAAGAAAACCCACGAGCAGGCGGTTTCATTGGGGATTCCATTGTCAGATCTCGATTCACACCCAACCTTGGATCTAGCGATTGACGGAGCCGATGAAGTTGATCCGTTTTTGAACTTGGTAAAAGGGCGAGGTGGGTCACTTCTGAGAGAGAAAATGGTGGAGGGTGCTTGTAAGAAGTTCATTGTGATTGTGGATGAGTCCAAGTTGGTGAATTATTTGGGAGGCAGTGGACTGGCTATGCCTGTTGAGATTATACCCTTTTGTTGGAAATTCACTGCTGCTAGGCTTCAAAATTTGTTTGAGGAGTCAGGTTGTGTTGCTAAGTTGAGGACTTTTGGAGAGAAAGATGAACCATTTGTAACTGATAACGGAAATTACATTGTGGACTTGTACTTAAAGAAGAGTATTGGGGATTTGAAGGTTGCTAGTGATGCAATTCTTCAGCTTGCTGGCGTTGTGGAGCATGGAATGTTTCTGGACATGGCCACTACAGTCATTATTGCAGGTGAACTTGGGATAACCATTAAAAAAAAGTAG 813 0.4674 MAIPYPHFISSEKAAMEAGLLVPSSPSSSLSPPVILTQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGDLLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPTLDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFIVIVDESKLVNYLGGSGLAMPVEIIPFCWKFTAARLQNLFEESGCVAKLRTFGEKDEPFVTDNGNYIVDLYLKKSIGDLKVASDAILQLAGVVEHGMFLDMATTVIIAGELGITIKKK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0272 270 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 88 262 IPR004788 GO:0004751|GO:0009052
Acco11g0272 270 Gene3D - 164 248 - -
Acco11g0272 270 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 170 251 - -
Acco11g0272 270 Hamap Ribose-5-phosphate isomerase A [rpiA]. 38 268 IPR020672 GO:0004751|GO:0009052
Acco11g0272 270 CDD RPI_A 41 261 IPR004788 GO:0004751|GO:0009052
Acco11g0272 270 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 25 269 - -
Acco11g0272 270 SUPERFAMILY NagB/RpiA/CoA transferase-like 37 221 IPR037171 -
Acco11g0272 270 Gene3D - 41 262 - -
Acco11g0272 270 FunFam Ribose-5-phosphate isomerase A 41 174 - -
Acco11g0272 270 NCBIfam ribose 5-phosphate isomerase A 41 264 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0272 Acco-ChrAcco11 3829596 3830408 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0272 11 3829596 3830408 Acco11g0272 11 3829596 3830408 ECH