Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0106 ATGGCGACCATGACGAGCTTGATCGGGCTTATCAATAAGATCCAACGAGCTTGTACTGTCCTGGGTGACCACGGTGGCGAGGGTTTGTCCCTCTGGGAGGCTCTCCCGTCGGTTGCTGTAGTTGGTGGCCAGAGTTCAGGGAAATCGTCAGTCTTGGAAAGTGTGGTAGGAAGAGATTTTCTGCCTCGTGGATCTGGTATTGTCACACGGAGGCCACTAGTGCTGCAACTTCATAAGACAGAGGGTGGGGCGGAATATGCGGAGTTTCTTCATGCCCCAAGAAAGAGATTCACTGACTTTGCTGCTGTGAGAAAAGAAATTGCAGATGAAACAGATCGTGTTACTGGAAAGACAAAGCAAATTTCTAACGTTCCAATTCACCTCAGCATATATTCACCTAATGTTGTAAACTTAACACTCATAGACCTTCCTGGACTGACCAAGGTTGCAGTAGAGGGACAACCAGAAACTATTGTTGAAGATATTGAAAACATGGTTCGATCTTATGTTGAGAAGCCAAACTCCATTATACTTGCTATTTCTCCTGCAAATCAAGATATTGCTACTTCAGATGCTATAAAACTTGCAAGGGAAGTTGATCCTTCAGGTGAAAGAACATTTGGAGTGTTGACTAAGCTTGACCTTATGGACAAGGGAACCAATGCTGTTGATGTTCTTGAAGGAAGGCAATACAGGTTGCAGCATCCTTGGGTTGGAATTGTGAACCGTTCACAAGCTGACATTAATAGAAATGTTGACATGATTGTTGCTCGTAAGAAGGAACGTGAATATTTTGAGACAAGCCCTGAATATGGACATTTGGCACATAAAATGGGCTCAGAATACCTTGCAAAGCTGCTATCCCAGCATCTGGAGCAAGTTATCAGGCAGAAAATACCTAGCATCATTTCATTAATAAATAAAACCATTGATGAGCTTAATGCAGAGTTGGATCGGATTGGAAGGCCTATCGCTGTTGACTCGGGGGCCCAGCTCTATACTATTTTAGAGATGTGTCGTGCATTTGATAAAGTATTTAAAGAACACCTGGATGGAGGGCGTCCTGGTGGTGACCGGATATATGGAGTTTTTGACCACCAATTACCAGCTGCTTTAAAAAAGCTCCCATTTGATCGTCATCTTTCTCAAAAAAATGTCCAGAGAGTTGTTACAGAAGCTGATGGGTATCAGCCCCATCTGATTGCACCGGAACAAGGATATAGAAGACTTATAGATGGATCTATCAGCTATTTTAAAGGCCCAGCTGAAGCTTCAGTGGATGCTGTTCATTTTGTTCTAAAGGAACTTGTACGGAAGTCAATTGCTGAAACTGAGGAATTAAGAAGATTTCCAACACTTCAATCTGATATAGCAGCTGCAGCAAATGAAGCATTGGAAAGATTTCGAGACGAAGGTAGGAAGACAGTTCTGCGGCTGGTTGATATGGAGTCTAGCTATTTAACAGCGGAATTTTTCCGGAAGATTCATCACATGGAACCAGAAAAGAATCCTCCTAATCGGAATGGTCAGGACAGTTTCTCAGATATTCACCTCAGGAGGATTGGATCAAATGTTAGTTCCTACATCAACATGGTTTGTGAGACACTAAGAAATTCCATACCAAAGGCTGTGGTTTATTGTCAAGTAAGGGAAGCTAAGAGATCATTGCTTAACCAGTTTTATGTTCAAGTTGGAAAGAAAGAGAAGGAGCAATTGGGGGCCATGTTGGATGAAGACCCTGCTCTTATGGAAAGGAGGACCCAAATAGCTAAGAGGCTTGAATTATACAAACAAGCTAGGGATGATATTGATTCTGTAGCTTGGAAATAA 1830 0.4251 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEGGAEYAEFLHAPRKRFTDFAAVRKEIADETDRVTGKTKQISNVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPETIVEDIENMVRSYVEKPNSIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMIVARKKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIISLINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDHQLPAALKKLPFDRHLSQKNVQRVVTEADGYQPHLIAPEQGYRRLIDGSISYFKGPAEASVDAVHFVLKELVRKSIAETEELRRFPTLQSDIAAAANEALERFRDEGRKTVLRLVDMESSYLTAEFFRKIHHMEPEKNPPNRNGQDSFSDIHLRRIGSNVSSYINMVCETLRNSIPKAVVYCQVREAKRSLLNQFYVQVGKKEKEQLGAMLDEDPALMERRTQIAKRLELYKQARDDIDSVAWK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0106 609 CDD DLP_1 35 300 IPR001401 GO:0003924|GO:0005525
Acco11g0106 609 Pfam Dynamin central region 221 488 IPR000375 -
Acco11g0106 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 308 IPR027417 -
Acco11g0106 609 PANTHER DYNAMIN 6 606 IPR022812 -
Acco11g0106 609 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Acco11g0106 609 SMART GED_2 513 606 IPR003130 GO:0003924|GO:0005525
Acco11g0106 609 FunFam dynamin-related protein 1E 4 309 - -
Acco11g0106 609 Pfam Dynamin family 38 212 IPR045063 -
Acco11g0106 609 Gene3D Dynamin, middle domain 333 586 - -
Acco11g0106 609 ProSiteProfiles GED domain profile. 518 609 IPR020850 -
Acco11g0106 609 FunFam Dynamin-related protein 1C 331 586 - -
Acco11g0106 609 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Acco11g0106 609 PRINTS Dynamin signature 201 217 IPR022812 -
Acco11g0106 609 PRINTS Dynamin signature 224 243 IPR022812 -
Acco11g0106 609 PRINTS Dynamin signature 182 200 IPR022812 -
Acco11g0106 609 PRINTS Dynamin signature 35 53 IPR022812 -
Acco11g0106 609 PRINTS Dynamin signature 132 149 IPR022812 -
Acco11g0106 609 PRINTS Dynamin signature 60 77 IPR022812 -
Acco11g0106 609 Pfam Dynamin GTPase effector domain 515 606 IPR003130 GO:0003924|GO:0005525
Acco11g0106 609 Gene3D - 4 309 IPR027417 -
Acco11g0106 609 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 300 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0106 Acco-ChrAcco11 1171080 1178398 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0106 11 1171080 1178398 Acco11g0106 11 1171080 1178398 ECH