Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco11g0100 ATGGATCCCAAGGCTCTGCGATTCATTAGGTACCAACCCATTTTCTCAATAGTTCGATCTGGGGACTTGGATGAGCTGAAGCAACTCTTGGAGCAGCTTAATAGAGAAGATGCTTTGTCGTTTCGTAATGTCATGTCCCTTCAGAAAGACGCCGGAGAGACGGCGCTGTACATCGCTGCCGAGCATAATCTGGCTGAAATTTTCGGCTACTTGCTCCAGTACTGTGACTTGGAGATTGTGAAGATCAGGTCCAAATCCGACATGAATGCCTTCCATGTTGCCGCCAAGCGTGGTCATCTAGATATCGTGAAAGAGTTTTTGAACAAGATGCCCGAGGTTTGTAAGTTGTGTGACTCCTCAAACACTAGTCCCCTGTATTCAGCTGCGGTTCAAGACCATTTGGATGTGGTGAATGCTATCATGGATGCAGATGTCGATTCAATGTGGATAGTTAGGAAAAATGGAAAAACTGCATTGCACAATGCTGCCAGGTATGGGCAACTTTGTATTGTGAAAGCTCTTATTGACCGGGATCGACGAATAGTCACTGTCAAAGATAAAAAGGGTCAAACTGCACTGCATATGGCTGTAAAAGGACAATGTCCCTTAGTGGTAAAGGAGATATTACAAGCTGATTCCACTATATTGAATGAACGAGATAAGAAGGGAAATACTGCTTTACACATGGCTACAAGGAAGGGTCGTTCACAGATTGTTAGTCTTCTGCTCAATTGCACAGCTACGGATATTAATGCGATCAATAACCAGAAGGAAACAGCGTTGGATTTGGCAGATAAATTGCAGTATGGGGATTCAGCTTTGGAAATCAAGGAGGCCCTTGCAGACTTTGGTGCCAAGTACGCCAGGCACGTTGGCAAAGTTGATGAAGCCATGGAACTTAAAAGAACTGTGAGTGATATAAAGCATGAAGTGCAGTCACAACTTGAGGCAAACTTAAAAACTCGCAAGCGAGTTTCTGGCATTGCTAAAGAATTGAAAAAGCTTCACAGAGAAGCAGTTCAAAATACTATTAACTCCGTCACAATGGTTTCTGTCCTTTTTGCCTCAGTAGCATTCTTGGCTATATTCAGTTTGCCTGGCCAATATATCACGGAAGGACCTGAGACTGGGAAGGCTCATATAGCTGATAACGTTGCTTTCCAAGCTTTCTGTCTTTTAAACTCTACATCACTTTTCATCTCTCTATCTGTGGTGGTTGTTCAAATCACTTTGGTAGCCTGGGACACAAGTGCTCAAAAGCAGGTTGTGTCAGTGGTTAACAAGCTTATGTGGGCTGCTGGTTCTTGCACATGTGGGGCTTTTCTGGCTTTGGCATTTGTTGTTGTTGGGAAAAAGCAAACATGGATGGCTATTACCATAACCATTTTGGGTGTACCCACTATAATTGGAACTCTAGCATACCTATGCTTCTATCTTTTCCAACAACATTTTGGCATATTCCGCAGCGATTCCCAGAGACGCATAAAGAGAGCAAGTGGGAGCAAATCTTTCTCTTGGTCCTACTCTGCAAATATATCTGAATTGGATGCTTATGATTCTAATATTGAGAAAATCTATGCTCTGTGA 1587 0.4304 MDPKALRFIRYQPIFSIVRSGDLDELKQLLEQLNREDALSFRNVMSLQKDAGETALYIAAEHNLAEIFGYLLQYCDLEIVKIRSKSDMNAFHVAAKRGHLDIVKEFLNKMPEVCKLCDSSNTSPLYSAAVQDHLDVVNAIMDADVDSMWIVRKNGKTALHNAARYGQLCIVKALIDRDRRIVTVKDKKGQTALHMAVKGQCPLVVKEILQADSTILNERDKKGNTALHMATRKGRSQIVSLLLNCTATDINAINNQKETALDLADKLQYGDSALEIKEALADFGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLEANLKTRKRVSGIAKELKKLHREAVQNTINSVTMVSVLFASVAFLAIFSLPGQYITEGPETGKAHIADNVAFQAFCLLNSTSLFISLSVVVVQITLVAWDTSAQKQVVSVVNKLMWAAGSCTCGAFLALAFVVVGKKQTWMAITITILGVPTIIGTLAYLCFYLFQQHFGIFRSDSQRRIKRASGSKSFSWSYSANISELDAYDSNIEKIYAL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco11g0100 528 Pfam Ankyrin repeat 223 255 IPR002110 GO:0005515
Acco11g0100 528 ProSiteProfiles Ankyrin repeat profile. 222 244 IPR002110 GO:0005515
Acco11g0100 528 Gene3D - 146 299 IPR036770 -
Acco11g0100 528 SUPERFAMILY Ankyrin repeat 13 270 IPR036770 -
Acco11g0100 528 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Acco11g0100 528 Pfam Ankyrin repeats (many copies) 72 125 IPR002110 GO:0005515
Acco11g0100 528 ProSiteProfiles Ankyrin repeat region circular profile. 222 244 - -
Acco11g0100 528 Pfam Ankyrin repeats (3 copies) 144 211 IPR002110 GO:0005515
Acco11g0100 528 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 16 507 - -
Acco11g0100 528 Pfam Domain of unknown function 338 447 IPR026961 -
Acco11g0100 528 Gene3D - 7 145 IPR036770 -
Acco11g0100 528 SMART ANK_2a 51 79 IPR002110 GO:0005515
Acco11g0100 528 SMART ANK_2a 120 149 IPR002110 GO:0005515
Acco11g0100 528 SMART ANK_2a 188 217 IPR002110 GO:0005515
Acco11g0100 528 SMART ANK_2a 86 115 IPR002110 GO:0005515
Acco11g0100 528 SMART ANK_2a 222 252 IPR002110 GO:0005515
Acco11g0100 528 SMART ANK_2a 154 184 IPR002110 GO:0005515
Acco11g0100 528 ProSiteProfiles Ankyrin repeat region circular profile. 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco11g0100 Acco-ChrAcco11 1122567 1125302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco11g0100 1 528 Miscellaneous Gene Families AT2G01680 65.363 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g0100 11 1122567 1125302 Acco11g0100 11 1122567 1125302 ECH