Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2623 ATGGCATTCTGGAAGGTGACCACTTTGGTCCTCCTCCTCTTCACATTCTCAACTTCTTCAAACGGCATCACATTCACCATCACCAACAACTGCAACAGCACCATATGGCCTGGCACCATGGCGGGTTCAGGGACGGCGCAGCTTTTGCAGACGGGGTTCAGGCTGGAGGCAGGGCGAAGTGTGAAGTTGACGACGAGCGGAGCGAGATGGTCGGGGAGGATATGGGGAAGGACAAGGTGCAAGTTTGATGGGAATGGGGAGGGCAAGTGCGAAACAGGTGATTGTGGAGGGAAGCTGGAGTGTGAAGGGAATGGAGCAGCTCCTCCGGTGTCCTTGTTCGAGATAACACTTGGCGGCGGCACTGACCAAGACTTCTACGATGTCAGCCTCGTCGACGGCTACAACCTCCCAATGCTTGTCGTCCCGGCAGACGTCTATGGCACCTCTGCCTGCAATTCCACCGGTTGTATTTCTGATCTCAACACAGGTTGTCCTAAAGAACTTCAAGTGAGGAGTGGGAACGGAAAGCAGGGAAGTGGTGGCGTAATTGGGTGCAGGAGCGCTTGCGAGGCATTTGATACGGACCAGTACTGCTGCAGAGGACAACATGCAGGCCCAGCCACATGCCCTCCTTCACACTACTCGACCATGTTCAAGAAGGCTTGTCCCAGAGCTTACAGCTACGCTTATGATGATGCCACCAGCACCTTCACTTGCAAAGCGTATGGCTATCACATCATCTTCTGCCCCTCCACCTCCTCTAGGAAACCAAGTAATAAACGCGACGGCAAGACTCAGCAAGTTGGTACCTCCAATGCTCTCTTCCCCTATTCATGCCCAACCTCCCTCTATATTGCCGCTCTTGCTTTTTGGACTTCTATGGCAACATGGTCTTTTACATGA 903 0.5327 MAFWKVTTLVLLLFTFSTSSNGITFTITNNCNSTIWPGTMAGSGTAQLLQTGFRLEAGRSVKLTTSGARWSGRIWGRTRCKFDGNGEGKCETGDCGGKLECEGNGAAPPVSLFEITLGGGTDQDFYDVSLVDGYNLPMLVVPADVYGTSACNSTGCISDLNTGCPKELQVRSGNGKQGSGGVIGCRSACEAFDTDQYCCRGQHAGPATCPPSHYSTMFKKACPRAYSYAYDDATSTFTCKAYGYHIIFCPSTSSRKPSNKRDGKTQQVGTSNALFPYSCPTSLYIAALAFWTSMATWSFT 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2623 300 SUPERFAMILY Osmotin, thaumatin-like protein 24 251 IPR037176 -
Acco10g2623 300 FunFam THAUMATIN-LIKE PROTEIN 1 23 250 - -
Acco10g2623 300 Pfam Thaumatin family 29 250 IPR001938 -
Acco10g2623 300 PIRSF PR5 1 293 IPR001938 -
Acco10g2623 300 ProSiteProfiles Thaumatin family profile. 24 250 IPR001938 -
Acco10g2623 300 PANTHER OS03G0233200 PROTEIN 10 250 IPR001938 -
Acco10g2623 300 Gene3D Thaumatin 23 250 IPR037176 -
Acco10g2623 300 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Acco10g2623 300 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Acco10g2623 300 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Acco10g2623 300 PRINTS Pathogenesis-related protein signature 86 115 IPR001938 -
Acco10g2623 300 SMART tha2 25 250 IPR001938 -
Acco10g2623 300 CDD TLP-PA 24 249 - -
Acco10g2623 300 ProSitePatterns Thaumatin family signature. 86 101 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2623 Acco-ChrAcco10 36983495 36984624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2623 8 274 Receptor kinase-like Gene Family AT5G38280 41.844 2.56e-66 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2623 10 36983495 36984624 Acco10g2623 10 36983495 36984624 ECH