Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2606 ATGGGTGAAGAAGTTAAACAGGTAAGTTTTCATTCTTCTCAACGAAAAACTGGGTTCTCTTTGGCTAACTATATATCCACATTAGCTTCAGCCTTGAGAACTTATGTATTTTTTTATGTGTTCTTTTTTGGTGGATCGGAACAACCTAAGGCAGAGGAGAATAAACAAGAGAAAACAGAGGAAAAACCAGGGGAAGAGAAGAAAGAAGAGAAAGCAGAGGAAAAGCCAGCGGAGGAGAAGAAAGAAAAGAAAGCAGAGGAAAAACCAACAGAGGAGAAGAAGGAAGAGCCTAAGCCACCATCACCATGCGTGCTTTCTGTTGACTTACATTGTGTGGGATGTGCCAAGAAAATTGAAAGATGCATTATGAAAATGCGAGGAGTTGAAGGGGTGGTCAAGGATATGGCTAAAAATGAAATAACCATAAAAGGGATAGTGGAACCACAAGCAATCTGCGATAAGATTACCAAGAGAACAAGGAGAAGAGCCAAAGTCATTTCTCCATTGCCCGCAGCAGAAGGAGAACCTATCCCAGAAGTTGTTACTTCTCAGGTTAGTGAACCAGTAACCGTGGAACTTAATGTGAACATGCACTGTGAGGCGTGTGCTGAGCAACTCAAGAGGAAAATTCTCAAAATGAGAGGAGTACAAACAGCAGAGACAGAACTGGGCACGGGGAAGGTTACTGTGACAGGGACAATGGACGCAAACAAACTAGTGGACTATGTGTACAGACGCACCAAAAAGCAAGCGAAGATAGTTCCACAACCAGAGCCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGCAGAGAAGACAGCAGAGGAGGCAAAAGCTGAAGAGAAGAAGGAAGAGAACACAGAGAAGAAAGAGGAAGAGAAACCTGCAGCAGAGGAGCCCAAGAAGGAAGGAGAAGGTAACAAAGAAGTAGGTGAAGATAAGAGTGAGAATAAAGAAGAAAAAGGAGGTGAAGAAAGCAAGGAAGAGGCCAAGAAAGAAGGAGGAGATCAGAATAATAATAATAATAATAATAATGGGATGGTGGTGATTGATGATGAAGGAATAAAGAGGATGATGTATTATTATCAGCAGCCACTGTATATGATTGAACGAATCCCTCCACCTCAGCTCTTCAGCGATGAAAACCCCAATGCATGCTGCATTTCATAA 1170 0.4222 MGEEVKQVSFHSSQRKTGFSLANYISTLASALRTYVFFYVFFFGGSEQPKAEENKQEKTEEKPGEEKKEEKAEEKPAEEKKEKKAEEKPTEEKKEEPKPPSPCVLSVDLHCVGCAKKIERCIMKMRGVEGVVKDMAKNEITIKGIVEPQAICDKITKRTRRRAKVISPLPAAEGEPIPEVVTSQVSEPVTVELNVNMHCEACAEQLKRKILKMRGVQTAETELGTGKVTVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEEPKEAEKTAEEAKAEEKKEENTEKKEEEKPAAEEPKKEGEGNKEVGEDKSENKEEKGGEESKEEAKKEGGDQNNNNNNNNGMVVIDDEGIKRMMYYYQQPLYMIERIPPPQLFSDENPNACCIS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2606 389 Pfam Heavy-metal-associated domain 105 154 IPR006121 GO:0046872
Acco10g2606 389 Pfam Heavy-metal-associated domain 194 240 IPR006121 GO:0046872
Acco10g2606 389 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 65 389 IPR044258 GO:0046872
Acco10g2606 389 MobiDBLite consensus disorder prediction 50 99 - -
Acco10g2606 389 MobiDBLite consensus disorder prediction 251 347 - -
Acco10g2606 389 ProSiteProfiles Heavy-metal-associated domain profile. 100 163 IPR006121 GO:0046872
Acco10g2606 389 MobiDBLite consensus disorder prediction 251 335 - -
Acco10g2606 389 CDD HMA 192 232 IPR006121 GO:0046872
Acco10g2606 389 Coils Coil 270 294 - -
Acco10g2606 389 CDD HMA 104 157 IPR006121 GO:0046872
Acco10g2606 389 SUPERFAMILY HMA, heavy metal-associated domain 105 158 IPR036163 GO:0046872
Acco10g2606 389 Gene3D - 185 253 - -
Acco10g2606 389 Gene3D - 101 163 - -
Acco10g2606 389 MobiDBLite consensus disorder prediction 49 101 - -
Acco10g2606 389 SUPERFAMILY HMA, heavy metal-associated domain 185 249 IPR036163 GO:0046872
Acco10g2606 389 Coils Coil 55 88 - -
Acco10g2606 389 ProSiteProfiles Heavy-metal-associated domain profile. 188 252 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2606 Acco-ChrAcco10 36898614 36900382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1736 05 33719606 33721697 Acco10g2606 10 36898614 36900382 CCT
Acco10g2606 10 36898614 36900382 Acco10g2606 10 36898614 36900382 ECH