Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2596 ATGTCTCAAATCACAATAAAATCTCCAAAACACTGTGCAGAGTACAAGCAAGGCTTCAAGATTGAAAGTAACTACAAGAAGCTGTTCTTGGCTCTCTCTTCATTCATCACTGCAATTATTCTATTATCACTAGCAATATGGGTCATCCTCCGTCCAGCCAAACCTCAATTCTCACTCCAACAAGTTAACATCTATGAGCTCAGTCTCTCAGGAACCCACATGAACTCTTCCATTCAGCTCACTCTGCTCTCAAAGAACCCAAACCAGAAAGTGGCCATTTACTATGACGACTTCCAAGTATATGCAACCTACAAGGACCAGCAGATAACTTCACATACCTATCTGCCACCGTTTTATCAAGATCATGAAGAGAGCAATCTCTTGACAGCTTCTCTGGTGGGAGATCTAGTCCCTGTGGCTCCTTCACTTGGCTATGAAATGGGTCGTGATCAAACAGTTGGAAGGCTGGTTTTGAATCTGAAAGTAAGTGGAAGGCTTCGGTGGAGAGTGGCGACGTGGGTCACTGGCCGTCATGGTTTCGAGGTTAATTGTGTTTCAGTCATGGCGTTCGGACCCTCCATGTCTCCTGCTCCTCTCACTTCAAAACAGGGTGCTCAGTGTTCTACCTCTGTTTAA 636 0.4497 MSQITIKSPKHCAEYKQGFKIESNYKKLFLALSSFITAIILLSLAIWVILRPAKPQFSLQQVNIYELSLSGTHMNSSIQLTLLSKNPNQKVAIYYDDFQVYATYKDQQITSHTYLPPFYQDHEESNLLTASLVGDLVPVAPSLGYEMGRDQTVGRLVLNLKVSGRLRWRVATWVTGRHGFEVNCVSVMAFGPSMSPAPLTSKQGAQCSTSV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2596 211 Pfam Late embryogenesis abundant protein 81 184 IPR004864 -
Acco10g2596 211 PANTHER OS05G0367900 PROTEIN 25 198 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2596 Acco-ChrAcco10 36848824 36849459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2596 28 184 EF-hand Containing Proteins AT5G21130 21.739 4.53e-07 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2596 10 36848824 36849459 Acco10g2596 10 36848824 36849459 ECH